Difference between revisions of "RXN-8975"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glycerophosph...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8975 RXN-8975] == * direction: ** REVERSIBLE * common name: ** phospho-N-acetylmuramoyl-pentape...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8975 RXN-8975] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** glycerophosphodiester phosphodiesterase
+
** phospho-N-acetylmuramoyl-pentapeptide-transferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Glycerophosphodiesters]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[Alcohols]][c]
+
** 1 [[CPD-9646]][c] '''+''' 1 [[C3]][c] '''<=>''' 1 [[UMP]][c] '''+''' 1 [[C4]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a glycerophosphodiester[c] '''=>''' 1 H+[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 an alcohol[c]
+
** 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''+''' 1 UDP-N-acetyl-&alpha;-D-muramoyl-L-alanyl-&gamma;-D-glutamyl-L-lysyl-D-alanyl-D-alanine[c] '''<=>''' 1 UMP[c] '''+''' 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-&gamma;-D-glutamyl-L-lysyl- D-alanyl-D-alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-23_002410]]
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* Gene: [[Ec-07_007020]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
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*** Assignment: GO-TERM
−
* [[Ec-23_002720]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6952]], glycerophosphodiester degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6952 PWY-6952]
+
* [[PWY-6471]], peptidoglycan biosynthesis IV (Enterococcus faecium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6471 PWY-6471]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5265 PWY-5265]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21920 21920]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00857 R00857]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05629 R05629]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/Q99387 Q99387]
+
{{#set: common name=phospho-N-acetylmuramoyl-pentapeptide-transferase}}
−
** [http://www.uniprot.org/uniprot/P10908 P10908]
+
{{#set: ec number=EC-2.7.8.13}}
−
** [http://www.uniprot.org/uniprot/Q06282 Q06282]
+
{{#set: gene associated=Ec-07_007020}}
−
** [http://www.uniprot.org/uniprot/Q9V208 Q9V208]
+
{{#set: in pathway=PWY-6471|PWY-5265}}
−
** [http://www.uniprot.org/uniprot/P09394 P09394]
+
−
** [http://www.uniprot.org/uniprot/Q9S3K5 Q9S3K5]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=glycerophosphodiester phosphodiesterase}}
+
−
{{#set: ec number=EC-3.1.4.46}}
+
−
{{#set: gene associated=Ec-23_002410|Ec-23_002720}}
+
−
{{#set: in pathway=PWY-6952}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:53, 21 March 2018

Reaction RXN-8975

  • direction:
    • REVERSIBLE
  • common name:
    • phospho-N-acetylmuramoyl-pentapeptide-transferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 di-trans,octa-cis-undecaprenyl phosphate[c] + 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine[c] <=> 1 UMP[c] + 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6471, peptidoglycan biosynthesis IV (Enterococcus faecium): PWY-6471
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5265, peptidoglycan biosynthesis II (staphylococci): PWY-5265
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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