Difference between revisions of "Ec-24 002690"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate--CoA ligase (GDP-fo...")
 
(Created page with "Category:Gene == Gene Ec-24_002690 == * left end position: ** 2969862 * transcription direction: ** POSITIVE * right end position: ** 2982087 * centisome position: ** 59.5...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] ==
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== Gene Ec-24_002690 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2969862
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* common name:
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* transcription direction:
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** Succinate--CoA ligase (GDP-forming), alpha subunit
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4]
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** 2982087
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* centisome position:
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** 59.544052   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0340_0013
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** Esi0340_0013
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** SPT, LCB
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[CPD-1137]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 coenzyme A[c] '''+''' 1 GTP[c] '''+''' 1 itaconate[c] '''=>''' 1 GDP[c] '''+''' 1 itaconyl-CoA[c] '''+''' 1 phosphate[c]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-5129]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY3DJ-12]]
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* [[Ec-10_000030]]
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* [[SPHINGOLIPID-SYN-PWY]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5749]], itaconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=2969862}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2982087}}
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{{#set: common name=Succinate--CoA ligase (GDP-forming), alpha subunit}}
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{{#set: centisome position=59.544052    }}
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{{#set: ec number=EC-6.2.1.4}}
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{{#set: common name=Esi_0340_0013|Esi0340_0013|SPT, LCB}}
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{{#set: gene associated=Ec-10_000030}}
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{{#set: reaction associated=SERINE-C-PALMITOYLTRANSFERASE-RXN}}
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{{#set: in pathway=PWY-5749}}
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{{#set: pathway associated=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:53, 21 March 2018

Gene Ec-24_002690

  • left end position:
    • 2969862
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2982087
  • centisome position:
    • 59.544052
  • Synonym(s):
    • Esi_0340_0013
    • Esi0340_0013
    • SPT, LCB

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_002690&oldid=30039"