Difference between revisions of "AMP-DEAMINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11357 RXN-11357] == * direction: ** LEFT-TO-RIGHT * common name: ** 9,9′-dicis-ζ-car...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosine/A...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11357 RXN-11357] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 9,9′-dicis-ζ-carotene desaturase
+
** Adenosine/AMP deaminase domain
−
** zeta-carotene desaturase, chloroplast precursor
+
** AMP deaminase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.4.17 EC-3.5.4.17]
 +
** [http://enzyme.expasy.org/EC/3.5.4.6 EC-3.5.4.6]
 
* Synonym(s):
 
* Synonym(s):
−
** ζ-carotene desaturase
 
−
** ZDS
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-7524]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[CPD-7496]][c]
+
** 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[IMP]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 7,9,9'-cis-neurosporene[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 prolycopene[c]
+
** 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 IMP[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-02_004660]]
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* Gene: [[Ec-04_006560]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
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*** Assignment: GO-TERM
 +
* Gene: [[Ec-00_010560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
+
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14777 14777]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P10759 P10759]
 +
** [http://www.uniprot.org/uniprot/Q02356 Q02356]
 +
** [http://www.uniprot.org/uniprot/P23109 P23109]
 +
** [http://www.uniprot.org/uniprot/P15274 P15274]
 +
** [http://www.uniprot.org/uniprot/Q7M3H8 Q7M3H8]
 +
** [http://www.uniprot.org/uniprot/Q01433 Q01433]
 +
** [http://www.uniprot.org/uniprot/Q01432 Q01432]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=9,9′-dicis-ζ-carotene desaturase}}
+
{{#set: common name=Adenosine/AMP deaminase domain}}
−
{{#set: common name=zeta-carotene desaturase, chloroplast precursor}}
+
{{#set: common name=AMP deaminase}}
−
{{#set: common name=ζ-carotene desaturase|ZDS}}
+
{{#set: ec number=EC-3.5.4.17}}
−
{{#set: gene associated=Ec-02_004660}}
+
{{#set: ec number=EC-3.5.4.6}}
−
{{#set: in pathway=PWY-6475}}
+
{{#set: gene associated=Ec-04_006560|Ec-00_010560}}
 +
{{#set: in pathway=PWY-6596}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:53, 21 March 2018

Reaction AMP-DEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenosine/AMP deaminase domain
    • AMP deaminase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 AMP[c] + 1 H+[c] + 1 H2O[c] => 1 IMP[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links






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