Difference between revisions of "ORNDECARBOX-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.79-RXN 1.14.13.79-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ent-kaurenoate mo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ornithine decar...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.79-RXN 1.14.13.79-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ent-kaurenoate monooxygenase
+
** Ornithine decarboxylase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.1.1.17 EC-4.1.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD1F-132]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[CPD1F-136]][c]
+
** 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PUTRESCINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 ent-kaur-16-en-19-oate[c] '''=>''' 1 H2O[c] '''+''' 1 NADP+[c] '''+''' 1 ent-7α-hydroxykaur-16-en-19-oate[c]
+
** 1 L-ornithine[c] '''+''' 1 H+[c] '''=>''' 1 putrescine[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-10_006240]]
+
* Gene: [[Ec-11_003270]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[Ec-00_005850]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-00_005820]]
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
+
* [[ORNDEG-PWY]], superpathway of ornithine degradation: [http://metacyc.org/META/NEW-IMAGE?object=ORNDEG-PWY ORNDEG-PWY]
−
** '''3''' reactions found over '''15''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
+
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19241 19241]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06294 R06294]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P24169 P24169]
 +
** [http://www.uniprot.org/uniprot/P27121 P27121]
 +
** [http://www.uniprot.org/uniprot/P27116 P27116]
 +
** [http://www.uniprot.org/uniprot/P27120 P27120]
 +
** [http://www.uniprot.org/uniprot/P43099 P43099]
 +
** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
 +
** [http://www.uniprot.org/uniprot/P08432 P08432]
 +
** [http://www.uniprot.org/uniprot/P27118 P27118]
 +
** [http://www.uniprot.org/uniprot/P11926 P11926]
 +
** [http://www.uniprot.org/uniprot/P14019 P14019]
 +
** [http://www.uniprot.org/uniprot/P00860 P00860]
 +
** [http://www.uniprot.org/uniprot/P09057 P09057]
 +
** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
 +
** [http://www.uniprot.org/uniprot/P44317 P44317]
 +
** [http://www.uniprot.org/uniprot/O66940 O66940]
 +
** [http://www.uniprot.org/uniprot/P27119 P27119]
 +
** [http://www.uniprot.org/uniprot/P49725 P49725]
 +
** [http://www.uniprot.org/uniprot/P50134 P50134]
 +
** [http://www.uniprot.org/uniprot/P93351 P93351]
 +
** [http://www.uniprot.org/uniprot/P93357 P93357]
 +
** [http://www.uniprot.org/uniprot/O15696 O15696]
 +
** [http://www.uniprot.org/uniprot/Q84527 Q84527]
 +
** [http://www.uniprot.org/uniprot/P41931 P41931]
 +
** [http://www.uniprot.org/uniprot/O69865 O69865]
 +
** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ent-kaurenoate monooxygenase}}
+
{{#set: common name=Ornithine decarboxylase}}
−
{{#set: gene associated=Ec-10_006240|Ec-00_005850|Ec-00_005820}}
+
{{#set: ec number=EC-4.1.1.17}}
−
{{#set: in pathway=PWY-5047|PWY-5034}}
+
{{#set: gene associated=Ec-11_003270}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=ORNDEG-PWY|PWY-6305|PWY-46}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=aragem}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction ORNDECARBOX-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ornithine decarboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ORNDEG-PWY, superpathway of ornithine degradation: ORNDEG-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6305, putrescine biosynthesis IV: PWY-6305
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-46, putrescine biosynthesis III: PWY-46
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ORNDECARBOX-RXN&oldid=30117"