Difference between revisions of "RXN-11917"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13431 RXN-13431] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11917 RXN-11917] == * direction: ** LEFT-TO-RIGHT * common name: ** 7-methyl-3-oxo-6-octenoyl-C...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13431 RXN-13431] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11917 RXN-11917] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 7-methyl-3-oxo-6-octenoyl-CoA:acetyl-CoA C-acyltransferase
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
 
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
 
* Synonym(s):
 
* Synonym(s):
 +
** 7-methyl-3-oxo-6-octenoyl-CoA thiolase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 9 [[MALONYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 21 [[PROTON]][c] '''+''' 13 [[NADPH]][c] '''=>''' 13 [[NADP]][c] '''+''' 10 [[CO-A]][c] '''+''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 9 [[CARBON-DIOXIDE]][c] '''+''' 8 [[WATER]][c]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-12897]][c] '''=>''' 1 [[CPD-12902]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
** 9 malonyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''+''' 21 H+[c] '''+''' 13 NADPH[c] '''=>''' 13 NADP+[c] '''+''' 10 coenzyme A[c] '''+''' 1 icosapentaenoate[c] '''+''' 9 CO2[c] '''+''' 8 H2O[c]
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** 1 coenzyme A[c] '''+''' 1 7-methyl-3-oxooct-6-enoyl-CoA[c] '''=>''' 1 5-methylhex-4-enoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-26_003940]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7050]], icosapentaenoate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7050 PWY-7050]
+
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* Category: [[orthology]]
** [[meneco]]:
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** Source: [[orthology-aragem]]
*** [[added for gapfilling]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08091 R08091]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=7-methyl-3-oxo-6-octenoyl-CoA:acetyl-CoA C-acyltransferase}}
 
{{#set: ec number=EC-2.3.1}}
 
{{#set: ec number=EC-2.3.1}}
{{#set: in pathway=PWY-7050}}
+
{{#set: common name=7-methyl-3-oxo-6-octenoyl-CoA thiolase}}
{{#set: reconstruction category=gap-filling}}
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{{#set: gene associated=Ec-26_003940}}
{{#set: reconstruction tool=meneco}}
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{{#set: in pathway=PWY-6672}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:54, 21 March 2018

Reaction RXN-11917

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 7-methyl-3-oxo-6-octenoyl-CoA:acetyl-CoA C-acyltransferase
  • ec number:
  • Synonym(s):
    • 7-methyl-3-oxo-6-octenoyl-CoA thiolase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 7-methyl-3-oxooct-6-enoyl-CoA[c] => 1 5-methylhex-4-enoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links