Difference between revisions of "RXN-10705"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-08_003590 == * left end position: ** 3421394 * transcription direction: ** NEGATIVE * right end position: ** 3424363 * centisome position: ** 51.0...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10705 RXN-10705] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-08_003590 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10705 RXN-10705] ==
−
* left end position:
+
* direction:
−
** 3421394
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** ClpP/crotonase-like domain
−
* right end position:
+
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
−
** 3424363
+
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
−
* centisome position:
+
* ec number:
−
** 51.08795   
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0342_0001
 
−
** Esi0342_0001
 
−
** Fe/MnSOD
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[SUPEROX-DISMUT-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[CPD-11526]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-11527]][c]
−
***ec-number
+
* With common name(s):
−
== Pathways associated ==
+
** 1 OPC4-trans-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 OPC4-3-hydroxyacyl-CoA[c]
−
* [[DETOX1-PWY-1]]
+
 
−
* [[PWY-6854]]
+
== Genes associated with this reaction  ==
−
* [[DETOX1-PWY]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-16_003560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_001250]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_001380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways ==
 +
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 +
** '''10''' reactions found over '''19''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=3421394}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=NEGATIVE}}
+
{{#set: common name=ClpP/crotonase-like domain}}
−
{{#set: right end position=3424363}}
+
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
−
{{#set: centisome position=51.08795    }}
+
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
−
{{#set: common name=Esi_0342_0001|Esi0342_0001|Fe/MnSOD}}
+
{{#set: ec number=EC-4.2.1.17}}
−
{{#set: reaction associated=SUPEROX-DISMUT-RXN}}
+
{{#set: gene associated=Ec-16_003560|Ec-16_001250|Ec-06_001380|Ec-14_006530}}
−
{{#set: pathway associated=DETOX1-PWY-1|PWY-6854|DETOX1-PWY}}
+
{{#set: in pathway=PWY-735}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction RXN-10705

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 OPC4-trans-2-enoyl-CoA[c] + 1 H2O[c] => 1 OPC4-3-hydroxyacyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 10 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10705&oldid=30165"