Difference between revisions of "Ec-02 006350"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMETB12-RXN HOMOCYSMETB12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionine...")
 
(Created page with "Category:Gene == Gene Ec-02_006350 == * left end position: ** 6446425 * transcription direction: ** POSITIVE * right end position: ** 6447282 * centisome position: ** 98.7...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMETB12-RXN HOMOCYSMETB12-RXN] ==
+
== Gene Ec-02_006350 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 6446425
−
* common name:
+
* transcription direction:
−
** Methionine synthase
+
** POSITIVE
−
** Homocysteine S-methyltransferase
+
* right end position:
−
* ec number:
+
** 6447282
−
** [http://enzyme.expasy.org/EC/2.1.1.13 EC-2.1.1.13]
+
* centisome position:
 +
** 98.75354   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0355_0019
 +
** Esi0355_0019
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[NADH-DEHYDROG-A-RXN]]
−
** 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[MET]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 an N5-methyl-tetrahydrofolate[c] '''+''' 1 L-homocysteine[c] '''=>''' 1 a tetrahydrofolate[c] '''+''' 1 L-methionine[c]
+
* Reaction: [[NADH-DEHYDROGENASE-RXN]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: go-term
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN0-5330]]
−
* [[Ec-06_000980]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: go-term
−
***EC-NUMBER
+
== Pathways associated ==
−
* [[Ec-06_000970]]
+
* [[PWY-6692]]
−
** ESILICULOSUS_GENOME
+
* [[PWY-3781]]
−
***EC-NUMBER
+
* [[PWY-7269]]
−
== Pathways ==
+
* [[PWY-7279]]
−
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
+
* [[PWY0-1567]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-5083]]
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
+
* [[PWY0-1335]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY0-1334]]
−
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
+
* [[PWY0-1568]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-4302]]
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
+
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
−
* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine: [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSCAT-PWY ADENOSYLHOMOCYSCAT-PWY]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=6446425}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11172 11172]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=6447282}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
+
{{#set: centisome position=98.75354    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0355_0019|Esi0355_0019}}
−
** [http://www.uniprot.org/uniprot/Q57195 Q57195]
+
{{#set: reaction associated=NADH-DEHYDROG-A-RXN|NADH-DEHYDROGENASE-RXN|RXN0-5330}}
−
** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
+
{{#set: pathway associated=PWY-6692|PWY-3781|PWY-7269|PWY-7279|PWY0-1567|PWY-5083|PWY0-1335|PWY0-1334|PWY0-1568|PWY-4302}}
−
** [http://www.uniprot.org/uniprot/O33259 O33259]
+
−
** [http://www.uniprot.org/uniprot/Q55786 Q55786]
+
−
** [http://www.uniprot.org/uniprot/Q09582 Q09582]
+
−
** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
+
−
** [http://www.uniprot.org/uniprot/P13009 P13009]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Methionine synthase}}
+
−
{{#set: common name=Homocysteine S-methyltransferase}}
+
−
{{#set: ec number=EC-2.1.1.13}}
+
−
{{#set: gene associated=Ec-06_000980|Ec-06_000970}}
+
−
{{#set: in pathway=PWY-3841|HOMOSER-METSYN-PWY|1CMET2-PWY|PWY-2201|HSERMETANA-PWY|ADENOSYLHOMOCYSCAT-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:56, 21 March 2018

Gene Ec-02_006350

  • left end position:
    • 6446425
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6447282
  • centisome position:
    • 98.75354
  • Synonym(s):
    • Esi_0355_0019
    • Esi0355_0019

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_006350&oldid=30384"