Difference between revisions of "Ec-18 004530"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidyltransferase-li...")
 
(Created page with "Category:Gene == Gene Ec-18_004530 == * left end position: ** 4595351 * transcription direction: ** NEGATIVE * right end position: ** 4600278 * centisome position: ** 93.2...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN] ==
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== Gene Ec-18_004530 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4595351
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* common name:
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* transcription direction:
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** Cytidyltransferase-like domain
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.7.15 EC-2.7.7.15]
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** 4600278
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* centisome position:
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** 93.27713   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0066_0082
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** Esi0066_0082
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** GSS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTATHIONE-SYN-RXN]]
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** 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDP-CHOLINE]][c] '''+''' 1 [[PPI]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 phosphocholine[c] '''+''' 1 CTP[c] '''+''' 1 H+[c] '''=>''' 1 CDP-choline[c] '''+''' 1 diphosphate[c]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[GLUTATHIONESYN-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-15_001610]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY4FS-2]], phosphatidylcholine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-2 PWY4FS-2]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-3561]], choline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3561 PWY-3561]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4595351}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18997 18997]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4600278}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890]
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{{#set: centisome position=93.27713    }}
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* UNIPROT:
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{{#set: common name=Esi_0066_0082|Esi0066_0082|GSS}}
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** [http://www.uniprot.org/uniprot/P19836 P19836]
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{{#set: reaction associated=GLUTATHIONE-SYN-RXN}}
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** [http://www.uniprot.org/uniprot/P49586 P49586]
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{{#set: pathway associated=GLUTATHIONESYN-PWY}}
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** [http://www.uniprot.org/uniprot/P49584 P49584]
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** [http://www.uniprot.org/uniprot/P49585 P49585]
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** [http://www.uniprot.org/uniprot/P49587 P49587]
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** [http://www.uniprot.org/uniprot/P93470 P93470]
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** [http://www.uniprot.org/uniprot/Q42619 Q42619]
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** [http://www.uniprot.org/uniprot/Q42620 Q42620]
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** [http://www.uniprot.org/uniprot/Q42621 Q42621]
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** [http://www.uniprot.org/uniprot/Q42622 Q42622]
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** [http://www.uniprot.org/uniprot/P13259 P13259]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Cytidyltransferase-like domain}}
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{{#set: ec number=EC-2.7.7.15}}
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{{#set: gene associated=Ec-15_001610}}
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{{#set: in pathway=PWY4FS-2|PWY-7782|PWY-3561|PWY3O-450}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:56, 21 March 2018

Gene Ec-18_004530

  • left end position:
    • 4595351
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4600278
  • centisome position:
    • 93.27713
  • Synonym(s):
    • Esi_0066_0082
    • Esi0066_0082
    • GSS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-18_004530&oldid=30387"