Difference between revisions of "SAMDECARB-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmethionin...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmethionin...") |
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== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[Ec-22_002520]] | + | * Gene: [[Ec-22_002520]] |
| − | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
| − | ** [[ | + | ** Source: [[orthology-aragem]] |
| − | * [[Ec-27_006890]] | + | * Gene: [[Ec-27_006890]] |
| − | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
| − | ** [[ | + | ** Source: [[orthology-aragem]] |
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY] | * [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY] | ||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
* [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834] | * [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834] | ||
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-aragem]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | * [[annotation]] | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| Line 71: | Line 71: | ||
{{#set: ec number=EC-4.1.1.50}} | {{#set: ec number=EC-4.1.1.50}} | ||
{{#set: gene associated=Ec-22_002520|Ec-27_006890}} | {{#set: gene associated=Ec-22_002520|Ec-27_006890}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}} |
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|annotation}} |
| − | + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} | |
| − | {{#set: reconstruction source=aragem | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | + | ||
| − | {{#set: reconstruction tool=pathwaytools | + | |
| − | + | ||
Latest revision as of 19:57, 21 March 2018
Contents
Reaction SAMDECARB-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- S-adenosylmethionine decarboxylase subgroup
- S-Adenosylmethionine decarboxylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINE[c] + 1 PROTON[c] => 1 S-ADENOSYLMETHIONINAMINE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 S-adenosyl-L-methionine[c] + 1 H+[c] => 1 S-adenosyl 3-(methylthio)propylamine[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-22_002520
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
- Gene: Ec-27_006890
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- BSUBPOLYAMSYN-PWY, spermidine biosynthesis I: BSUBPOLYAMSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- ARGSPECAT-PWY, spermine biosynthesis: ARGSPECAT-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-6834, spermidine biosynthesis III: PWY-6834
- 1 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
