Difference between revisions of "THREDEHYD-RXN"

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(Created page with "Category:Gene == Gene Ec-14_005330 == * left end position: ** 4916703 * transcription direction: ** POSITIVE * right end position: ** 4919999 * centisome position: ** 74.9...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-14_005330 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] ==
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* left end position:
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* direction:
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** 4916703
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Tryptophan synthase beta subunit-like PLP-dependent enzyme
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* right end position:
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** L-threonine ammonia-lyase
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** 4919999
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.3.1.19 EC-4.3.1.19]
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** 74.944855   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0100_0072
 
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** Esi0100_0072
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[INORGPYROPHOSPHAT-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[THR]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 L-threonine[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxobutanoate[c]
 +
 
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-03_001910]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-06_007490]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY66-428]], L-threonine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-428 PWY66-428]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4916703}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22108 22108]
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{{#set: right end position=4919999}}
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* LIGAND-RXN:
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{{#set: centisome position=74.944855    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00996 R00996]
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{{#set: common name=Esi_0100_0072|Esi0100_0072}}
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* UNIPROT:
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{{#set: reaction associated=INORGPYROPHOSPHAT-RXN}}
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** [http://www.uniprot.org/uniprot/P25306 P25306]
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** [http://www.uniprot.org/uniprot/Q04513 Q04513]
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** [http://www.uniprot.org/uniprot/P37946 P37946]
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** [http://www.uniprot.org/uniprot/Q9JZW1 Q9JZW1]
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** [http://www.uniprot.org/uniprot/Q02145 Q02145]
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** [http://www.uniprot.org/uniprot/P66897 P66897]
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** [http://www.uniprot.org/uniprot/Q9WYJ1 Q9WYJ1]
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** [http://www.uniprot.org/uniprot/Q9PP95 Q9PP95]
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** [http://www.uniprot.org/uniprot/P25379 P25379]
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** [http://www.uniprot.org/uniprot/P00927 P00927]
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** [http://www.uniprot.org/uniprot/P20506 P20506]
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** [http://www.uniprot.org/uniprot/P0AGF6 P0AGF6]
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** [http://www.uniprot.org/uniprot/P04968 P04968]
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** [http://www.uniprot.org/uniprot/P20132 P20132]
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** [http://www.uniprot.org/uniprot/P09367 P09367]
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** [http://www.uniprot.org/uniprot/Q9RWU8 Q9RWU8]
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** [http://www.uniprot.org/uniprot/Q9JUX5 Q9JUX5]
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** [http://www.uniprot.org/uniprot/Q9ZD93 Q9ZD93]
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** [http://www.uniprot.org/uniprot/P31212 P31212]
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** [http://www.uniprot.org/uniprot/P36007 P36007]
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** [http://www.uniprot.org/uniprot/P73375 P73375]
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** [http://www.uniprot.org/uniprot/Q9T0D1 Q9T0D1]
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** [http://www.uniprot.org/uniprot/Q39469 Q39469]
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** [http://www.uniprot.org/uniprot/Q93968 Q93968]
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** [http://www.uniprot.org/uniprot/Q9XAA4 Q9XAA4]
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** [http://www.uniprot.org/uniprot/O94634 O94634]
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** [http://www.uniprot.org/uniprot/O59791 O59791]
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{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
 +
{{#set: common name=L-threonine ammonia-lyase}}
 +
{{#set: ec number=EC-4.3.1.19}}
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{{#set: gene associated=Ec-03_001910|Ec-06_007490}}
 +
{{#set: in pathway=PWY66-428}}
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{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:04, 21 March 2018

Reaction THREDEHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tryptophan synthase beta subunit-like PLP-dependent enzyme
    • L-threonine ammonia-lyase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-threonine[c] => 1 ammonium[c] + 1 2-oxobutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-428, L-threonine degradation V: PWY66-428
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=THREDEHYD-RXN&oldid=24319"