Difference between revisions of "RXN-11999"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate ki...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11999 RXN-11999] == * direction: ** LEFT-TO-RIGHT * common name: ** Carotenoid oxygenase * Syno...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11999 RXN-11999] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** Carotenoid oxygenase |
− | + | ||
− | + | ||
− | + | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[CPD-12932]][c] '''=>''' 1 [[CPD-12936]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 all-trans-3,4-didehydrolycopene[c] '''=>''' 1 apo-4'-lycopenal[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[Ec- | + | * Gene: [[Ec-21_004930]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | *** | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | * | + | * Gene: [[Ec-20_002250]] |
− | * [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ** | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | * | + | * Gene: [[Ec-06_002810]] |
− | * [[Ec- | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ** | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | *** | + | * Gene: [[Ec-06_002830]] |
− | * [[Ec- | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ** | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | + | * Gene: [[Ec-18_002140]] | |
− | + | ** Source: [[annotation-esiliculosus_genome]] | |
− | ** | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | * | + | |
− | * [[Ec- | + | |
− | ** | + | |
− | + | ||
− | + | ||
− | ** | + | |
− | * | + | |
− | + | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681] |
− | ** ''' | + | ** '''2''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
− | * [[ | + | * Category: [[annotation]] |
− | ** [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
− | *** | + | *** Tool: [[pathwaytools]] |
− | + | ||
− | + | ||
− | + | ||
== External links == | == External links == | ||
− | |||
− | |||
− | |||
− | |||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name= | + | {{#set: common name=Carotenoid oxygenase}} |
− | + | {{#set: gene associated=Ec-21_004930|Ec-20_002250|Ec-06_002810|Ec-06_002830|Ec-18_002140}} | |
− | + | {{#set: in pathway=PWY-6681}} | |
− | {{#set: gene associated=Ec- | + | |
− | {{#set: in pathway=PWY- | + | |
− | + | ||
− | + | ||
− | + | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
− |
Latest revision as of 19:57, 21 March 2018
Contents
Reaction RXN-11999
- direction:
- LEFT-TO-RIGHT
- common name:
- Carotenoid oxygenase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 all-trans-3,4-didehydrolycopene[c] => 1 apo-4'-lycopenal[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-21_004930
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
- Gene: Ec-20_002250
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
- Gene: Ec-06_002810
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
- Gene: Ec-06_002830
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
- Gene: Ec-18_002140
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
Pathways
- PWY-6681, neurosporaxanthin biosynthesis: PWY-6681
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome