Difference between revisions of "ARGSUCCINLYA-RXN"

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(Created page with "Category:Gene == Gene Ec-06_007490 == * left end position: ** 5184570 * transcription direction: ** POSITIVE * right end position: ** 5194866 * centisome position: ** 59.1...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] == * direction: ** REVERSIBLE * common name: ** Argininosuccinat...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-06_007490 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] ==
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* left end position:
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* direction:
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** 5184570
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** Argininosuccinate lyase
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* right end position:
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* ec number:
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** 5194866
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** [http://enzyme.expasy.org/EC/4.3.2.1 EC-4.3.2.1]
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* centisome position:
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** 59.199738   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0028_0036
 
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** Esi0028_0036
 
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** TAL2
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15122]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
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***ec-number
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* With common name(s):
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* [[RXN0-2381]]
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** 1 L-arginino-succinate[c] '''<=>''' 1 L-arginine[c] '''+''' 1 fumarate[c]
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** esiliculosus_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RXN0-2382]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-12_005890]]
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***automated-name-match
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** Source: [[annotation-esiliculosus_genome]]
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* [[THREDEHYD-RXN]]
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*** Assignment: EC-NUMBER
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** esiliculosus_genome
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** Source: [[orthology-aragem]]
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***ec-number
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== Pathways  ==
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** [[pantograph]]-[[aragem]]
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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* [[TRYPSYN-RXN]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** esiliculosus_genome
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
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***automated-name-match
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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* [[ILEUSYN-PWY]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5437]]
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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* [[PWY66-428]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5826]]
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* [[PWY-4983]], L-citrulline-nitric oxide cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
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* [[TRPSYN-PWY]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6949]]
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5184570}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24020 24020]
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{{#set: right end position=5194866}}
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* LIGAND-RXN:
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{{#set: centisome position=59.199738    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
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{{#set: common name=Esi_0028_0036|Esi0028_0036|TAL2}}
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* UNIPROT:
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{{#set: reaction associated=RXN-15122|RXN0-2381|RXN0-2382|THREDEHYD-RXN|TRYPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/P50987 P50987]
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{{#set: pathway associated=ILEUSYN-PWY|PWY-5437|PWY66-428|PWY-5826|TRPSYN-PWY|PWY-6949}}
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** [http://www.uniprot.org/uniprot/Q46104 Q46104]
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** [http://www.uniprot.org/uniprot/P11447 P11447]
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** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
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** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
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** [http://www.uniprot.org/uniprot/P44314 P44314]
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** [http://www.uniprot.org/uniprot/Q58201 Q58201]
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** [http://www.uniprot.org/uniprot/P33110 P33110]
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** [http://www.uniprot.org/uniprot/Q01592 Q01592]
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** [http://www.uniprot.org/uniprot/P40369 P40369]
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** [http://www.uniprot.org/uniprot/P50988 P50988]
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** [http://www.uniprot.org/uniprot/P73257 P73257]
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** [http://www.uniprot.org/uniprot/P50514 P50514]
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** [http://www.uniprot.org/uniprot/P04076 P04076]
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** [http://www.uniprot.org/uniprot/P04424 P04424]
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** [http://www.uniprot.org/uniprot/P20673 P20673]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Argininosuccinate lyase}}
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{{#set: ec number=EC-4.3.2.1}}
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{{#set: gene associated=Ec-12_005890}}
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{{#set: in pathway=PWY-4984|ARGSYN-PWY|PWY-5154|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:58, 21 March 2018

Reaction ARGSUCCINLYA-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Argininosuccinate lyase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-arginino-succinate[c] <=> 1 L-arginine[c] + 1 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4984, urea cycle: PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine): ARGSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline): PWY-5154
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle): ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-4983, L-citrulline-nitric oxide cycle: PWY-4983
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7400, L-arginine biosynthesis IV (archaebacteria): PWY-7400
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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