Difference between revisions of "ARGSUCCINLYA-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-06_007490 == * left end position: ** 5184570 * transcription direction: ** POSITIVE * right end position: ** 5194866 * centisome position: ** 59.1...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] == * direction: ** REVERSIBLE * common name: ** Argininosuccinat...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-06_007490 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] ==
−
* left end position:
+
* direction:
−
** 5184570
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Argininosuccinate lyase
−
* right end position:
+
* ec number:
−
** 5194866
+
** [http://enzyme.expasy.org/EC/4.3.2.1 EC-4.3.2.1]
−
* centisome position:
+
−
** 59.199738   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0028_0036
 
−
** Esi0028_0036
 
−
** TAL2
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN-15122]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
−
***ec-number
+
* With common name(s):
−
* [[RXN0-2381]]
+
** 1 L-arginino-succinate[c] '''<=>''' 1 L-arginine[c] '''+''' 1 fumarate[c]
−
** esiliculosus_genome
+
 
−
***automated-name-match
+
== Genes associated with this reaction  ==
−
* [[RXN0-2382]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** esiliculosus_genome
+
* Gene: [[Ec-12_005890]]
−
***automated-name-match
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[THREDEHYD-RXN]]
+
*** Assignment: EC-NUMBER
−
** esiliculosus_genome
+
** Source: [[orthology-aragem]]
−
***ec-number
+
== Pathways  ==
−
** [[pantograph]]-[[aragem]]
+
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
−
* [[TRYPSYN-RXN]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** esiliculosus_genome
+
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
−
***automated-name-match
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
== Pathways associated ==
+
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
−
* [[ILEUSYN-PWY]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5437]]
+
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
−
* [[PWY66-428]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5826]]
+
* [[PWY-4983]], L-citrulline-nitric oxide cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
−
* [[TRPSYN-PWY]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6949]]
+
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=5184570}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24020 24020]
−
{{#set: right end position=5194866}}
+
* LIGAND-RXN:
−
{{#set: centisome position=59.199738    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
−
{{#set: common name=Esi_0028_0036|Esi0028_0036|TAL2}}
+
* UNIPROT:
−
{{#set: reaction associated=RXN-15122|RXN0-2381|RXN0-2382|THREDEHYD-RXN|TRYPSYN-RXN}}
+
** [http://www.uniprot.org/uniprot/P50987 P50987]
−
{{#set: pathway associated=ILEUSYN-PWY|PWY-5437|PWY66-428|PWY-5826|TRPSYN-PWY|PWY-6949}}
+
** [http://www.uniprot.org/uniprot/Q46104 Q46104]
 +
** [http://www.uniprot.org/uniprot/P11447 P11447]
 +
** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
 +
** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
 +
** [http://www.uniprot.org/uniprot/P44314 P44314]
 +
** [http://www.uniprot.org/uniprot/Q58201 Q58201]
 +
** [http://www.uniprot.org/uniprot/P33110 P33110]
 +
** [http://www.uniprot.org/uniprot/Q01592 Q01592]
 +
** [http://www.uniprot.org/uniprot/P40369 P40369]
 +
** [http://www.uniprot.org/uniprot/P50988 P50988]
 +
** [http://www.uniprot.org/uniprot/P73257 P73257]
 +
** [http://www.uniprot.org/uniprot/P50514 P50514]
 +
** [http://www.uniprot.org/uniprot/P04076 P04076]
 +
** [http://www.uniprot.org/uniprot/P04424 P04424]
 +
** [http://www.uniprot.org/uniprot/P20673 P20673]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Argininosuccinate lyase}}
 +
{{#set: ec number=EC-4.3.2.1}}
 +
{{#set: gene associated=Ec-12_005890}}
 +
{{#set: in pathway=PWY-4984|ARGSYN-PWY|PWY-5154|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:58, 21 March 2018

Reaction ARGSUCCINLYA-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Argininosuccinate lyase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-arginino-succinate[c] <=> 1 L-arginine[c] + 1 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4984, urea cycle: PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine): ARGSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline): PWY-5154
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle): ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-4983, L-citrulline-nitric oxide cycle: PWY-4983
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7400, L-arginine biosynthesis IV (archaebacteria): PWY-7400
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ARGSUCCINLYA-RXN&oldid=30654"