Difference between revisions of "DTMPKI-RXN"

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(Created page with "Category:Gene == Gene Ec-22_002610 == * left end position: ** 2890291 * transcription direction: ** NEGATIVE * right end position: ** 2892981 * centisome position: ** 64.0...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidylate kinase * ec n...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-22_002610 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] ==
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* left end position:
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* direction:
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** 2890291
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** thymidylate kinase
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* right end position:
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* ec number:
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** 2892981
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** [http://enzyme.expasy.org/EC/2.7.4.12 EC-2.7.4.12]
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
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** 64.00324   
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** [http://enzyme.expasy.org/EC/2.7.4.9 EC-2.7.4.9]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0091_0058
 
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** Esi0091_0058
 
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** SAH1
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADENOSYLHOMOCYSTEINASE-RXN]]
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* With identifiers:
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** [[pantograph]]-[[aragem]]
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** 1 [[ATP]][c] '''+''' 1 [[TMP]][c] '''=>''' 1 [[TDP]][c] '''+''' 1 [[ADP]][c]
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* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
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* With common name(s):
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** esiliculosus_genome
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** 1 ATP[c] '''+''' 1 dTMP[c] '''=>''' 1 dTDP[c] '''+''' 1 ADP[c]
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***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-6154]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[METHIONINE-DEG1-PWY]]
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* Gene: [[Ec-20_004950]]
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* [[PWY-6151]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6153]]
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*** Assignment: GO-TERM
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* [[PWY-5041]]
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== Pathways ==
 +
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 +
** '''14''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
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** '''8''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2890291}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13517 13517]
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{{#set: right end position=2892981}}
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* LIGAND-RXN:
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{{#set: centisome position=64.00324    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02094 R02094]
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{{#set: common name=Esi_0091_0058|Esi0091_0058|SAH1}}
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* UNIPROT:
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{{#set: reaction associated=ADENOSYLHOMOCYSTEINASE-RXN|ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q57741 Q57741]
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{{#set: pathway associated=PWY-6154|METHIONINE-DEG1-PWY|PWY-6151|PWY-6153|PWY-5041}}
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** [http://www.uniprot.org/uniprot/Q9PPF3 Q9PPF3]
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** [http://www.uniprot.org/uniprot/P0A720 P0A720]
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** [http://www.uniprot.org/uniprot/Q8X8H7 Q8X8H7]
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** [http://www.uniprot.org/uniprot/Q9JVE7 Q9JVE7]
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** [http://www.uniprot.org/uniprot/P33803 P33803]
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** [http://www.uniprot.org/uniprot/P42490 P42490]
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** [http://www.uniprot.org/uniprot/P00572 P00572]
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** [http://www.uniprot.org/uniprot/Q80HT9 Q80HT9]
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** [http://www.uniprot.org/uniprot/P68693 P68693]
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** [http://www.uniprot.org/uniprot/P23919 P23919]
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** [http://www.uniprot.org/uniprot/P36590 P36590]
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** [http://www.uniprot.org/uniprot/Q9RA29 Q9RA29]
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** [http://www.uniprot.org/uniprot/O81650 O81650]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=thymidylate kinase}}
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{{#set: ec number=EC-2.7.4.12}}
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{{#set: ec number=EC-2.7.4.13}}
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{{#set: ec number=EC-2.7.4.9}}
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{{#set: gene associated=Ec-20_004950}}
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{{#set: in pathway=PWY-7210|PWY-7198|PWY-7184|PWY-7187|PWY-7197|PWY0-166|PWY-6545}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:04, 21 March 2018

Reaction DTMPKI-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 dTMP[c] => 1 dTDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV: PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II: PWY-7187
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7197, pyrimidine deoxyribonucleotide phosphorylation: PWY-7197
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 14 reactions found over 17 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=DTMPKI-RXN&oldid=24340"