Difference between revisions of "Ec-12 004720"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** FAD synthetase * ec numbe...")
 
(Created page with "Category:Gene == Gene Ec-12_004720 == * left end position: ** 4381487 * transcription direction: ** NEGATIVE * right end position: ** 4385180 * centisome position: ** 52.5...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] ==
+
== Gene Ec-12_004720 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4381487
−
* common name:
+
* transcription direction:
−
** FAD synthetase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.7.7.2 EC-2.7.7.2]
+
** 4385180
 +
* centisome position:
 +
** 52.5607   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0070_0043
 +
** Esi0070_0043
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PANTOATE-BETA-ALANINE-LIG-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FMN]][c] '''=>''' 1 [[FAD]][c] '''+''' 1 [[PPI]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 FMN[c] '''=>''' 1 FAD[c] '''+''' 1 diphosphate[c]
+
** Source: [[orthology-aragem]]
−
 
+
== Pathways associated ==
−
== Genes associated with this reaction  ==
+
* [[PANTO-PWY]]
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-01_006670]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
+
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=4381487}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17237 17237]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=4385180}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
+
{{#set: centisome position=52.5607    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0070_0043|Esi0070_0043}}
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
+
{{#set: reaction associated=PANTOATE-BETA-ALANINE-LIG-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
+
{{#set: pathway associated=PANTO-PWY}}
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=FAD synthetase}}
+
−
{{#set: ec number=EC-2.7.7.2}}
+
−
{{#set: gene associated=Ec-01_006670}}
+
−
{{#set: in pathway=PWY66-366|PWY-6167|PWY-6168|RIBOSYN2-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:00, 21 March 2018

Gene Ec-12_004720

  • left end position:
    • 4381487
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4385180
  • centisome position:
    • 52.5607
  • Synonym(s):
    • Esi_0070_0043
    • Esi0070_0043

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_004720&oldid=23703"