Difference between revisions of "RXN-12567"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1099 CPD-1099] == * smiles: ** C(OC1(C(C(C(C(CO)O1)O)O)O))C2(C(C(C(C(O2)OC3(CO)(C(C(C(CO)O3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1099 CPD-1099] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] ==
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* smiles:
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* direction:
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** C(OC1(C(C(C(C(CO)O1)O)O)O))C2(C(C(C(C(O2)OC3(CO)(C(C(C(CO)O3)O)O))O)O)O)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=MUPFEKGTMRGPLJ-ZQSKZDJDSA-N
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* common name:
 
* common name:
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** raffinose
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** ClpP/crotonase-like domain
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* molecular weight:
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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** 504.441   
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
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** melitose
 
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** melitriose
 
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** gossypose
 
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** 6G-α-D-galactosylsucrose
 
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** (2S,3R,4S,5S,6R)-2-[[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
 
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** α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf
 
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** α-D-galactopyranosyl-(1->6)-α-D-glucopyranosyl-(1->2)-β-D-fructofuranoside
 
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** D-raffinose
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-11501]]
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** 1 [[OH-HEXANOYL-COA]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD0-2121]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[2.4.1.67-RXN]]
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** 1 (S)-3-hydroxyhexanoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 trans-hex-2-enoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-16_001250]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-16_003560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 512-69-6
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30549 30549]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=439242 439242]
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* LIGAND-RXN:
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* KEGG-GLYCAN : G00249
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** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749]
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* HMDB : HMDB03213
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=ClpP/crotonase-like domain}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00492 C00492]
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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* CHEMSPIDER:
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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** [http://www.chemspider.com/Chemical-Structure.388379.html 388379]
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{{#set: ec number=EC-4.2.1.17}}
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* CHEBI:
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{{#set: gene associated=Ec-16_001250|Ec-14_006530|Ec-06_001380|Ec-16_003560}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16634 16634]
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{{#set: in pathway=PWY-6863}}
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* METABOLIGHTS : MTBLC16634
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C(OC1(C(C(C(C(CO)O1)O)O)O))C2(C(C(C(C(O2)OC3(CO)(C(C(C(CO)O3)O)O))O)O)O)}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: inchi key=InChIKey=MUPFEKGTMRGPLJ-ZQSKZDJDSA-N}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=raffinose}}
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{{#set: molecular weight=504.441    }}
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{{#set: common name=melitose|melitriose|gossypose|6G-α-D-galactosylsucrose|(2S,3R,4S,5S,6R)-2-[[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol|α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf|α-D-galactopyranosyl-(1->6)-α-D-glucopyranosyl-(1->2)-β-D-fructofuranoside|D-raffinose}}
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{{#set: produced by=RXN-11501}}
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{{#set: consumed or produced by=2.4.1.67-RXN}}
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Latest revision as of 20:04, 21 March 2018

Reaction RXN-12567

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxyhexanoyl-CoA[c] => 1 H2O[c] + 1 trans-hex-2-enoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12567&oldid=24370"