Difference between revisions of "RXN-14642"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14642 RXN-14642] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7646 PWY-7646] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14642 RXN-14642] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** dermatan sulfate degradation I (bacterial)
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** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
* [[RXN-12178]]
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** 1 [[Acceptor]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYCOLLATE]][c] '''+''' 1 [[Donor-H2]][c]
== Reaction(s) not found ==
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* With common name(s):
* [http://metacyc.org/META/NEW-IMAGE?object=4.2.2.19-RXN 4.2.2.19-RXN]
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** 1 an oxidized unknown electron acceptor[c] '''+''' 1 glycolaldehyde[c] '''=>''' 1 H+[c] '''+''' 1 glycolate[c] '''+''' 1 an reduced unknown electron acceptor[c]
* [http://metacyc.org/META/NEW-IMAGE?object=CHONDRO-4-SULFATASE-RXN CHONDRO-4-SULFATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11577 RXN-11577]
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PWY-7295]], L-arabinose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7295 PWY-7295]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7294]], xylose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7294 PWY-7294]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=dermatan sulfate degradation I (bacterial)}}
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{{#set: ec number=EC-1.2.1}}
{{#set: reaction found=1}}
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{{#set: in pathway=PWY-7295|PWY-7294}}
{{#set: reaction not found=4}}
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{{#set: reconstruction category=gap-filling}}
{{#set: completion rate=25.0}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 18:59, 21 March 2018

Reaction RXN-14642

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized unknown electron acceptor[c] + 1 glycolaldehyde[c] => 1 H+[c] + 1 glycolate[c] + 1 an reduced unknown electron acceptor[c]

Genes associated with this reaction

Pathways

  • PWY-7295, L-arabinose degradation IV: PWY-7295
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7294, xylose degradation IV: PWY-7294
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links