Difference between revisions of "3.1.26.4-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE PREPHENATE] == * smiles: ** C(=O)([O-])C(=O)CC1(C(=O)[O-])(C=CC(O)C=C1) * inchi key:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA-DNA hybrid ribonu...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE PREPHENATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] ==
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* smiles:
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* direction:
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** C(=O)([O-])C(=O)CC1(C(=O)[O-])(C=CC(O)C=C1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=FPWMCUPFBRFMLH-XGAOUMNUSA-L
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* common name:
 
* common name:
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** prephenate
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** RNA-DNA hybrid ribonuclease
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* molecular weight:
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* ec number:
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** 224.17   
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** [http://enzyme.expasy.org/EC/3.1.26.4 EC-3.1.26.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[PREPHENATEDEHYDROG-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** n [[WATER]][c] '''+''' 1 [[RNA-DNA-hybrids]][c] '''=>''' 1 [[DNA-Holder]][c] '''+''' n [[Nucleoside-Monophosphates]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[PREPHENATE-TRANSAMINE-RXN]]
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** n H2O[c] '''+''' 1 a RNA-DNA hybrid[c] '''=>''' 1 DNA[c] '''+''' n a nucleoside 5'-monophosphate[c]
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* [[PREPHENATEDEHYDRAT-RXN]]
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* [[PREPHENATE-DEHYDROGENASE-NADP+-RXN]]
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== Genes associated with this reaction  ==
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* [[PREPHENATE-ASP-TRANSAMINE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHORISMATEMUT-RXN]]
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* Gene: [[Ec-25_002560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-17_003740]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-22_003570]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 126-49-8
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P52975 P52975]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460303 5460303]
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** [http://www.uniprot.org/uniprot/Q9CDG3 Q9CDG3]
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* HMDB : HMDB12283
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** [http://www.uniprot.org/uniprot/Q9PM39 Q9PM39]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9JX40 Q9JX40]
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** [http://www.genome.jp/dbget-bin/www_bget?C00254 C00254]
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** [http://www.uniprot.org/uniprot/P43807 P43807]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P43808 P43808]
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** [http://www.chemspider.com/Chemical-Structure.4573884.html 4573884]
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** [http://www.uniprot.org/uniprot/Q9PJA1 Q9PJA1]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9CG17 Q9CG17]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29934 29934]
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** [http://www.uniprot.org/uniprot/Q9JTD9 Q9JTD9]
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* BIGG : 34406
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** [http://www.uniprot.org/uniprot/Q57599 Q57599]
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{{#set: smiles=C(=O)([O-])C(=O)CC1(C(=O)[O-])(C=CC(O)C=C1)}}
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** [http://www.uniprot.org/uniprot/O44114 O44114]
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{{#set: inchi key=InChIKey=FPWMCUPFBRFMLH-XGAOUMNUSA-L}}
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** [http://www.uniprot.org/uniprot/P0A7Y4 P0A7Y4]
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{{#set: common name=prephenate}}
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** [http://www.uniprot.org/uniprot/P10442 P10442]
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{{#set: molecular weight=224.17    }}
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** [http://www.uniprot.org/uniprot/P13319 P13319]
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{{#set: consumed by=PREPHENATEDEHYDROG-RXN}}
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** [http://www.uniprot.org/uniprot/Q7LYY8 Q7LYY8]
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{{#set: consumed or produced by=PREPHENATE-TRANSAMINE-RXN|PREPHENATEDEHYDRAT-RXN|PREPHENATE-DEHYDROGENASE-NADP+-RXN|PREPHENATE-ASP-TRANSAMINE-RXN|CHORISMATEMUT-RXN}}
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** [http://www.uniprot.org/uniprot/P0A2B9 P0A2B9]
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** [http://www.uniprot.org/uniprot/Q04740 Q04740]
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** [http://www.uniprot.org/uniprot/Q49050 Q49050]
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** [http://www.uniprot.org/uniprot/O69014 O69014]
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** [http://www.uniprot.org/uniprot/Q54222 Q54222]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=RNA-DNA hybrid ribonuclease}}
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{{#set: ec number=EC-3.1.26.4}}
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{{#set: gene associated=Ec-25_002560|Ec-17_003740|Ec-22_003570}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:05, 21 March 2018

Reaction 3.1.26.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA-DNA hybrid ribonuclease
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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