Difference between revisions of "3.4.25.1-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.25.1-RXN 3.4.25.1-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Proteasome component...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.25.1-RXN 3.4.25.1-RXN] ==
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* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
 
* common name:
 
* common name:
−
** phytyl diphosphate biosynthesis
+
** Proteasome component (PCI) domain
 +
** Proteasome, subunit alpha/beta
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.4.25.1 EC-3.4.25.1]
 
* Synonym(s):
 
* Synonym(s):
−
** phytyl pyrophosphate biosynthesis
 
−
** phytyl-PP biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
−
* [[RXN-7658]]
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** 1 [[WATER]][c] '''+''' 1 [[General-Protein-Substrates]][c] '''=>''' 1 [[Peptides-holder]][c]
−
* [[RXN-7659]]
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* With common name(s):
−
* [[RXN-7660]]
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** 1 H2O[c] '''+''' 1 a protein[c] '''=>''' 1 a peptide[c]
−
== Reaction(s) not found ==
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-06_001170]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_002770]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-22_002360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-26_004490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-26_006330]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_000320]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002300]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_004350]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-26_002800]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-10_001570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-05_000270]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-04_004400]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-01_005740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
* UNIPROT:
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5063 PWY-5063]
+
** [http://www.uniprot.org/uniprot/Q7DLR9 Q7DLR9]
−
{{#set: taxonomic range=TAX-3041}}
+
** [http://www.uniprot.org/uniprot/P28062 P28062]
−
{{#set: taxonomic range=TAX-2763}}
+
** [http://www.uniprot.org/uniprot/Q9TRJ7 Q9TRJ7]
−
{{#set: taxonomic range=TAX-1117}}
+
** [http://www.uniprot.org/uniprot/P30656 P30656]
−
{{#set: taxonomic range=TAX-33090}}
+
** [http://www.uniprot.org/uniprot/P30657 P30657]
−
{{#set: common name=phytyl diphosphate biosynthesis}}
+
** [http://www.uniprot.org/uniprot/P28074 P28074]
−
{{#set: common name=phytyl pyrophosphate biosynthesis|phytyl-PP biosynthesis}}
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** [http://www.uniprot.org/uniprot/P40302 P40302]
−
{{#set: reaction found=3}}
+
** [http://www.uniprot.org/uniprot/O24633 O24633]
−
{{#set: reaction not found=3}}
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** [http://www.uniprot.org/uniprot/P40303 P40303]
−
{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q9V122 Q9V122]
 +
** [http://www.uniprot.org/uniprot/P40306 P40306]
 +
** [http://www.uniprot.org/uniprot/P28063 P28063]
 +
** [http://www.uniprot.org/uniprot/P25786 P25786]
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** [http://www.uniprot.org/uniprot/P28076 P28076]
 +
** [http://www.uniprot.org/uniprot/O13268 O13268]
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** [http://www.uniprot.org/uniprot/P34064 P34064]
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** [http://www.uniprot.org/uniprot/P60901 P60901]
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** [http://www.uniprot.org/uniprot/P18421 P18421]
 +
** [http://www.uniprot.org/uniprot/P18053 P18053]
 +
** [http://www.uniprot.org/uniprot/P28072 P28072]
 +
** [http://www.uniprot.org/uniprot/P22769 P22769]
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** [http://www.uniprot.org/uniprot/P25043 P25043]
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** [http://www.uniprot.org/uniprot/P28065 P28065]
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** [http://www.uniprot.org/uniprot/P30186 P30186]
 +
** [http://www.uniprot.org/uniprot/P60900 P60900]
 +
** [http://www.uniprot.org/uniprot/P34065 P34065]
 +
** [http://www.uniprot.org/uniprot/P34067 P34067]
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** [http://www.uniprot.org/uniprot/P40301 P40301]
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** [http://www.uniprot.org/uniprot/Q8AVD2 Q8AVD2]
 +
** [http://www.uniprot.org/uniprot/Q7LZF1 Q7LZF1]
 +
** [http://www.uniprot.org/uniprot/P40307 P40307]
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** [http://www.uniprot.org/uniprot/P23724 P23724]
 +
** [http://www.uniprot.org/uniprot/P28070 P28070]
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** [http://www.uniprot.org/uniprot/P22141 P22141]
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** [http://www.uniprot.org/uniprot/P49721 P49721]
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** [http://www.uniprot.org/uniprot/P49720 P49720]
 +
** [http://www.uniprot.org/uniprot/P25156 P25156]
 +
** [http://www.uniprot.org/uniprot/Q09682 Q09682]
 +
** [http://www.uniprot.org/uniprot/Q09720 Q09720]
 +
** [http://www.uniprot.org/uniprot/P48004 P48004]
 +
** [http://www.uniprot.org/uniprot/P38624 P38624]
 +
** [http://www.uniprot.org/uniprot/P32379 P32379]
 +
** [http://www.uniprot.org/uniprot/Q7LZF0 Q7LZF0]
 +
** [http://www.uniprot.org/uniprot/P62333 P62333]
 +
** [http://www.uniprot.org/uniprot/Q24178 Q24178]
 +
** [http://www.uniprot.org/uniprot/Q27575 Q27575]
 +
** [http://www.uniprot.org/uniprot/P21242 P21242]
 +
** [http://www.uniprot.org/uniprot/P21243 P21243]
 +
** [http://www.uniprot.org/uniprot/P23638 P23638]
 +
** [http://www.uniprot.org/uniprot/P23639 P23639]
 +
** [http://www.uniprot.org/uniprot/P12881 P12881]
 +
** [http://www.uniprot.org/uniprot/P25787 P25787]
 +
** [http://www.uniprot.org/uniprot/P20618 P20618]
 +
** [http://www.uniprot.org/uniprot/P25788 P25788]
 +
** [http://www.uniprot.org/uniprot/P25789 P25789]
 +
** [http://www.uniprot.org/uniprot/P18420 P18420]
 +
** [http://www.uniprot.org/uniprot/P18422 P18422]
 +
** [http://www.uniprot.org/uniprot/P21670 P21670]
 +
** [http://www.uniprot.org/uniprot/P52428 P52428]
 +
** [http://www.uniprot.org/uniprot/P93395 P93395]
 +
** [http://www.uniprot.org/uniprot/O04861 O04861]
 +
** [http://www.uniprot.org/uniprot/Q8LD27 Q8LD27]
 +
** [http://www.uniprot.org/uniprot/O48551 O48551]
 +
** [http://www.uniprot.org/uniprot/O24030 O24030]
 +
** [http://www.uniprot.org/uniprot/P42742 P42742]
 +
** [http://www.uniprot.org/uniprot/O81147 O81147]
 +
** [http://www.uniprot.org/uniprot/O23708 O23708]
 +
** [http://www.uniprot.org/uniprot/O24616 O24616]
 +
** [http://www.uniprot.org/uniprot/O81149 O81149]
 +
** [http://www.uniprot.org/uniprot/Q42134 Q42134]
 +
** [http://www.uniprot.org/uniprot/P34066 P34066]
 +
** [http://www.uniprot.org/uniprot/O23712 O23712]
 +
** [http://www.uniprot.org/uniprot/O23710 O23710]
 +
** [http://www.uniprot.org/uniprot/Q7DLS1 Q7DLS1]
 +
** [http://www.uniprot.org/uniprot/O81153 O81153]
 +
** [http://www.uniprot.org/uniprot/O23714 O23714]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Proteasome component (PCI) domain}}
 +
{{#set: common name=Proteasome, subunit alpha/beta}}
 +
{{#set: ec number=EC-3.4.25.1}}
 +
{{#set: gene associated=Ec-06_001170|Ec-08_002770|Ec-22_002360|Ec-26_004490|Ec-26_006330|Ec-14_000320|Ec-13_002300|Ec-08_004350|Ec-26_002800|Ec-10_001570|Ec-05_000270|Ec-04_004400|Ec-01_005740}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:27, 21 March 2018

Reaction 3.4.25.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Proteasome component (PCI) domain
    • Proteasome, subunit alpha/beta
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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