Difference between revisions of "RXN0-5063"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA-i(6)A37 thiotransferas...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** caffeine degradation IV (bacteria, via demethylation and oxidation)
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** tRNA-i(6)A37 thiotransferase enzyme MiaB
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* ec number:
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** [http://enzyme.expasy.org/EC/2.8.4.3 EC-2.8.4.3]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
* [[PWY-6538]]
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** 1 [[6-Dimethylallyladenosine37-tRNAs]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[CPD-11592]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[CH33ADO]][c] '''+''' 1 [[MET]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
* [[RXN-11519]]
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* With common name(s):
* [[RXN-11520]]
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** 1 N6-dimethylallyladenosine37 in tRNA[c] '''+''' 2 S-adenosyl-L-methionine[c] '''+''' 1 a sulfurated [sulfur carrier][c] '''+''' 1 an reduced unknown electron acceptor[c] '''=>''' 1 2-methylthio-N6-dimethylallyladenosine37 in tRNA[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 1 an oxidized unknown electron acceptor[c] '''+''' 1 5'-deoxyadenosine[c] '''+''' 1 L-methionine[c] '''+''' 2 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
* [[RXN-11521]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_004930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* LIGAND-MAP:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.genome.jp/dbget-bin/www_bget?map00232 map00232]
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{{#set: common name=tRNA-i(6)A37 thiotransferase enzyme MiaB}}
* UM-BBD-PWY : caf
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{{#set: ec number=EC-2.8.4.3}}
{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=Ec-02_004930}}
{{#set: common name=caffeine degradation IV (bacteria, via demethylation and oxidation)}}
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{{#set: in pathway=}}
{{#set: reaction found=4}}
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{{#set: reconstruction category=annotation}}
{{#set: reaction not found=5}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: completion rate=80.0}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:27, 21 March 2018

Reaction RXN0-5063

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tRNA-i(6)A37 thiotransferase enzyme MiaB
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links