Difference between revisions of "2.7.9.3-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** AIR synthase-related pr...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6578 PWY-6578] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 8-amino-7-oxononanoate biosynthesis III
+
** AIR synthase-related protein, C-terminal domain
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.9.3 EC-2.7.9.3]
 
* Synonym(s):
 
* Synonym(s):
−
** 7-keto-8-aminopelargonate biosynthesis III
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
  '''1''' reactions found over '''2''' reactions in the full pathway
+
* With identifiers:
−
* [[7KAPSYN-RXN]]
+
** 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[SE-2]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[SEPO3]][c]
−
== Reaction(s) not found ==
+
* With common name(s):
−
* [http://metacyc.org/META/NEW-IMAGE?object=6-CARBOXYHEXANOATE--COA-LIGASE-RXN 6-CARBOXYHEXANOATE--COA-LIGASE-RXN]
+
** 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 selenide[c] '''=>''' 1 phosphate[c] '''+''' 1 AMP[c] '''+''' 1 selenophosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-01_005250]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
* RHEA:
−
{{#set: common name=8-amino-7-oxononanoate biosynthesis III}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
−
{{#set: common name=7-keto-8-aminopelargonate biosynthesis III}}
+
* LIGAND-RXN:
−
{{#set: reaction found=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
−
{{#set: reaction not found=2}}
+
* UNIPROT:
−
{{#set: completion rate=50.0}}
+
** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=AIR synthase-related protein, C-terminal domain}}
 +
{{#set: ec number=EC-2.7.9.3}}
 +
{{#set: gene associated=Ec-01_005250}}
 +
{{#set: in pathway=PWY0-901|PWY-6281}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:31, 21 March 2018

Reaction 2.7.9.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • AIR synthase-related protein, C-terminal domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 H2O[c] + 1 selenide[c] => 1 phosphate[c] + 1 AMP[c] + 1 selenophosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-901, L-selenocysteine biosynthesis I (bacteria): PWY0-901
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=2.7.9.3-RXN&oldid=27442"