Difference between revisions of "SERINE-C-PALMITOYLTRANSFERASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1567 PWY0-1567] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIG...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1567 PWY0-1567] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
 
* common name:
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** NADH to cytochrome bo oxidase electron transfer II
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** Aminotransferase, class I/classII
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.50 EC-2.3.1.50]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[RXN0-5330]]
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** 1 [[PALMITYL-COA]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-18_003900]]
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** 1 palmitoyl-CoA[c] '''+''' 1 L-serine[c] '''+''' 1 H+[c] '''=>''' 1 coenzyme A[c] '''+''' 1 3-dehydrosphinganine[c] '''+''' 1 CO2[c]
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*** [[Ec-02_006350]]
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*** [[Ec-05_005740]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-24_002690]]
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== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5268 RXN0-5268]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-11_004190]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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* [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1567 PWY0-1567]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14761 14761]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01281 R01281]
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{{#set: common name=NADH to cytochrome bo oxidase electron transfer II}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P25045 P25045]
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{{#set: total reaction=2}}
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** [http://www.uniprot.org/uniprot/O15270 O15270]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/P48241 P48241]
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** [http://www.uniprot.org/uniprot/Q09925 Q09925]
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** [http://www.uniprot.org/uniprot/P40970 P40970]
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** [http://www.uniprot.org/uniprot/Q9XVI6 Q9XVI6]
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** [http://www.uniprot.org/uniprot/Q20375 Q20375]
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** [http://www.uniprot.org/uniprot/Q9M304 Q9M304]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Aminotransferase, class I/classII}}
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{{#set: ec number=EC-2.3.1.50}}
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{{#set: gene associated=Ec-24_002690|Ec-11_004190}}
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{{#set: in pathway=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:00, 21 March 2018

Reaction SERINE-C-PALMITOYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aminotransferase, class I/classII
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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