Difference between revisions of "Ec-21 000330"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** Class II glu...")
(Created page with "Category:Gene == Gene Ec-21_000330 == * left end position: ** 862140 * transcription direction: ** NEGATIVE * right end position: ** 868248 * centisome position: ** 11.681...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] ==
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== Gene Ec-21_000330 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 862140
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* common name:
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* transcription direction:
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** Class II glutamine amidotransferase domain
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** NEGATIVE
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** Amidophosphoribosyltransferase
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* right end position:
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* ec number:
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** 868248
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** [http://enzyme.expasy.org/EC/2.4.2.14 EC-2.4.2.14]
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* centisome position:
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** 11.681926   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0170_0038
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** Esi0170_0038
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''<=>''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PRPP]][c]
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* With common name(s):
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** 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 5-phospho-&beta;-D-ribosylamine[c] '''<=>''' 1 L-glutamine[c] '''+''' 1 H2O[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-02_005190]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-07_005050]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=862140}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14905 14905]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=868248}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01072 R01072]
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{{#set: centisome position=11.681926    }}
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* UNIPROT:
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{{#set: common name=Esi_0170_0038|Esi0170_0038}}
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** [http://www.uniprot.org/uniprot/P28173 P28173]
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P35433 P35433]
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** [http://www.uniprot.org/uniprot/Q06203 Q06203]
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** [http://www.uniprot.org/uniprot/O29388 O29388]
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** [http://www.uniprot.org/uniprot/O67236 O67236]
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** [http://www.uniprot.org/uniprot/P65829 P65829]
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** [http://www.uniprot.org/uniprot/O57979 O57979]
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** [http://www.uniprot.org/uniprot/Q9X0X4 Q9X0X4]
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** [http://www.uniprot.org/uniprot/Q9RXT6 Q9RXT6]
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** [http://www.uniprot.org/uniprot/Q9K0C4 Q9K0C4]
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** [http://www.uniprot.org/uniprot/Q9V253 Q9V253]
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** [http://www.uniprot.org/uniprot/Q9PIT3 Q9PIT3]
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** [http://www.uniprot.org/uniprot/Q57657 Q57657]
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** [http://www.uniprot.org/uniprot/Q9JVC9 Q9JVC9]
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** [http://www.uniprot.org/uniprot/O26742 O26742]
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** [http://www.uniprot.org/uniprot/P43854 P43854]
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** [http://www.uniprot.org/uniprot/P35853 P35853]
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** [http://www.uniprot.org/uniprot/P41390 P41390]
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** [http://www.uniprot.org/uniprot/Q27601 Q27601]
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** [http://www.uniprot.org/uniprot/Q38999 Q38999]
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** [http://www.uniprot.org/uniprot/P04046 P04046]
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** [http://www.uniprot.org/uniprot/Q55621 Q55621]
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** [http://www.uniprot.org/uniprot/Q55038 Q55038]
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** [http://www.uniprot.org/uniprot/Q9STG9 Q9STG9]
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** [http://www.uniprot.org/uniprot/Q9T0J5 Q9T0J5]
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** [http://www.uniprot.org/uniprot/P52418 P52418]
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** [http://www.uniprot.org/uniprot/P52419 P52419]
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** [http://www.uniprot.org/uniprot/Q22134 Q22134]
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** [http://www.uniprot.org/uniprot/Q9ZB05 Q9ZB05]
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** [http://www.uniprot.org/uniprot/P00497 P00497]
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** [http://www.uniprot.org/uniprot/P0AG16 P0AG16]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Class II glutamine amidotransferase domain}}
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{{#set: common name=Amidophosphoribosyltransferase}}
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{{#set: ec number=EC-2.4.2.14}}
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{{#set: gene associated=Ec-02_005190|Ec-07_005050}}
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{{#set: in pathway=PWY-6121|PWY-6122|PWY-7282|PWY-6277}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:00, 21 March 2018

Gene Ec-21_000330

  • left end position:
    • 862140
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 868248
  • centisome position:
    • 11.681926
  • Synonym(s):
    • Esi_0170_0038
    • Esi0170_0038

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_000330&oldid=23749"