Difference between revisions of "RXN-9527"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** CDP-diacylgl...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9527 RXN-9527] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-decanoyl-[acyl-carrier...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9527 RXN-9527] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
+
** 3-oxo-decanoyl-[acyl-carrier protein] synthase
 +
** Beta-ketoacyl synthase, N-terminal
 +
** Thiolase-like, subgroup
 +
** beta-ketoacyl synthase, partial
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.8.5 EC-2.7.8.5]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLYCEROL-3P]][c] '''+''' 1 [[CDPDIACYLGLYCEROL]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c]
+
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[3-oxo-decanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 sn-glycerol 3-phosphate[c] '''+''' 1 a CDP-diacylglycerol[c] '''<=>''' 1 CMP[c] '''+''' 1 H+[c] '''+''' 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c]
+
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 an octanoyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-decanoyl-[acp][c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-11_001460]]
+
* Gene: [[Ec-27_003480]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-12_000650]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-12_000640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-27_002090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8]
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''28''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 40: Line 48:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12593 12593]
+
{{#set: common name=3-oxo-decanoyl-[acyl-carrier protein] synthase}}
−
* LIGAND-RXN:
+
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01801 R01801]
+
{{#set: common name=Thiolase-like, subgroup}}
−
* UNIPROT:
+
{{#set: common name=beta-ketoacyl synthase, partial}}
−
** [http://www.uniprot.org/uniprot/Q9JTH1 Q9JTH1]
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
** [http://www.uniprot.org/uniprot/P46322 P46322]
+
{{#set: ec number=EC-2.3.1.41}}
−
** [http://www.uniprot.org/uniprot/P44528 P44528]
+
{{#set: gene associated=Ec-27_003480|Ec-12_000650|Ec-12_000640|Ec-27_002090}}
−
** [http://www.uniprot.org/uniprot/P47360 P47360]
+
{{#set: in pathway=PWY-5971}}
−
** [http://www.uniprot.org/uniprot/Q9PNM7 Q9PNM7]
+
−
** [http://www.uniprot.org/uniprot/O25660 O25660]
+
−
** [http://www.uniprot.org/uniprot/O51663 O51663]
+
−
** [http://www.uniprot.org/uniprot/O67908 O67908]
+
−
** [http://www.uniprot.org/uniprot/Q49839 Q49839]
+
−
** [http://www.uniprot.org/uniprot/P75520 P75520]
+
−
** [http://www.uniprot.org/uniprot/P74372 P74372]
+
−
** [http://www.uniprot.org/uniprot/Q48959 Q48959]
+
−
** [http://www.uniprot.org/uniprot/P0ABF8 P0ABF8]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase}}
+
−
{{#set: ec number=EC-2.7.8.5}}
+
−
{{#set: gene associated=Ec-11_001460}}
+
−
{{#set: in pathway=PWY4FS-8|PWY0-1545|PWY-5269|PWY4FS-7|PWY-5668}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:00, 21 March 2018

Reaction RXN-9527

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-decanoyl-[acyl-carrier protein] synthase
    • Beta-ketoacyl synthase, N-terminal
    • Thiolase-like, subgroup
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 28 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-decanoyl-[acyl-carrier protein] synthase" cannot be used as a page name in this wiki.


"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-9527&oldid=23765"