Difference between revisions of "PHOSPHOMEVALONATE-KINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.99.1.3-RXN 4.99.1.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** sirohydrochlorin coba...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOMEVALONATE-KINASE-RXN PHOSPHOMEVALONATE-KINASE-RXN] == * direction: ** REVERSIBLE * common n...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.99.1.3-RXN 4.99.1.3-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOMEVALONATE-KINASE-RXN PHOSPHOMEVALONATE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** sirohydrochlorin cobaltochelatase
+
** GHMP kinase, C-terminal domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.99.1.3 EC-4.99.1.3]
+
** [http://enzyme.expasy.org/EC/2.7.4.2 EC-2.7.4.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SIROHYDROCHLORIN]][c] '''+''' 1 [[CO+2]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[COBALT-SIROHYDROCHLORIN]][c]
+
** 1 [[CPD-499]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[CPD-641]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 sirohydrochlorin[c] '''+''' 1 Co2+[c] '''=>''' 2 H+[c] '''+''' 1 cobalt-sirohydrochlorin[c]
+
** 1 (R)-mevalonate 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 (R)-mevalonate diphosphate[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-10_002430]]
+
* Gene: [[Ec-25_002910]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
+
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
−
** '''3''' reactions found over '''15''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15893 15893]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16341 16341]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05807 R05807]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03245 R03245]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: common name=sirohydrochlorin cobaltochelatase}}
+
** [http://www.uniprot.org/uniprot/P24521 P24521]
−
{{#set: ec number=EC-4.99.1.3}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=Ec-10_002430}}
+
{{#set: common name=GHMP kinase, C-terminal domain}}
−
{{#set: in pathway=PWY-7377}}
+
{{#set: ec number=EC-2.7.4.2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Ec-25_002910}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: in pathway=PWY-922|PWY-7391}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:06, 21 March 2018

Reaction PHOSPHOMEVALONATE-KINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • GHMP kinase, C-terminal domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (R)-mevalonate 5-phosphate[c] + 1 ATP[c] <=> 1 (R)-mevalonate diphosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-922, mevalonate pathway I: PWY-922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
    • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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