Difference between revisions of "Ec-11 004190"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] == * direction: ** LEFT-TO-RIGHT * common name: ** (2E)-5-methylhexa-2,4-dieno...")
(Created page with "Category:Gene == Gene Ec-11_004190 == * left end position: ** 4271700 * transcription direction: ** POSITIVE * right end position: ** 4279733 * centisome position: ** 67.9...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] ==
+
== Gene Ec-11_004190 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4271700
−
* common name:
+
* transcription direction:
−
** (2E)-5-methylhexa-2,4-dienoyl-CoA hydratase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/4.2.1 EC-4.2.1]
+
** 4279733
 +
* centisome position:
 +
** 67.91625   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0192_0016
 +
** Esi0192_0016
 +
** SPT, LCB
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-12904]][c] '''=>''' 1 [[CPD-12905]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H2O[c] '''+''' 1 (2E)-5-methylhexa-2,4-dienoyl-CoA[c] '''=>''' 1 3-hydroxy-5-methylhex-4-enoyl-CoA[c]
+
== Pathways associated ==
−
 
+
* [[PWY-5129]]
−
== Genes associated with this reaction  ==
+
* [[PWY3DJ-12]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[SPHINGOLIPID-SYN-PWY]]
−
* [[Ec-17_000320]]
+
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways ==
+
−
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
+
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=4271700}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R08093 R08093]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=4279733}}
−
{{#set: common name=(2E)-5-methylhexa-2,4-dienoyl-CoA hydratase}}
+
{{#set: centisome position=67.91625    }}
−
{{#set: ec number=EC-4.2.1}}
+
{{#set: common name=Esi_0192_0016|Esi0192_0016|SPT, LCB}}
−
{{#set: gene associated=Ec-17_000320}}
+
{{#set: reaction associated=SERINE-C-PALMITOYLTRANSFERASE-RXN}}
−
{{#set: in pathway=PWY-6672}}
+
{{#set: pathway associated=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:02, 21 March 2018

Gene Ec-11_004190

  • left end position:
    • 4271700
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4279733
  • centisome position:
    • 67.91625
  • Synonym(s):
    • Esi_0192_0016
    • Esi0192_0016
    • SPT, LCB

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_004190&oldid=23994"