Difference between revisions of "Ec-08 005870"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
(Created page with "Category:Gene == Gene Ec-08_005870 == * left end position: ** 5622408 * transcription direction: ** POSITIVE * right end position: ** 5634963 * centisome position: ** 83.9...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941] ==
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== Gene Ec-08_005870 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** 5622408
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* common name:
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* transcription direction:
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** L-lysine biosynthesis II
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** POSITIVE
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* right end position:
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** 5634963
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* centisome position:
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** 83.9533   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0005_0190
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** Esi0005_0190
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** TrpRS
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''6''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Ec-01_007470]]
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== Pathways associated ==
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** 2 reconstruction source(s) associated:
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* [[TRNA-CHARGING-PWY]]
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ASPARTATEKIN-RXN]]
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** 4 associated gene(s):
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*** [[Ec-11_000830]]
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*** [[Ec-13_002530]]
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*** [[Ec-27_003730]]
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*** [[Ec-24_000610]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DIAMINOPIMDECARB-RXN]]
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** 4 associated gene(s):
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*** [[Ec-01_000060]]
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*** [[Ec-09_002410]]
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*** [[Ec-09_002360]]
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*** [[Ec-09_002420]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DIAMINOPIMEPIM-RXN]]
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** 1 associated gene(s):
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*** [[Ec-06_009100]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DIHYDRODIPICSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-14014]]
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** 1 associated gene(s):
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*** [[Ec-15_000750]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.89-RXN 2.3.1.89-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4822 RXN-4822]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1239}}
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{{#set: left end position=5622408}}
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{{#set: common name=L-lysine biosynthesis II}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: reaction found=6}}
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{{#set: right end position=5634963}}
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{{#set: total reaction=9}}
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{{#set: centisome position=83.9533    }}
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{{#set: completion rate=67.0}}
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{{#set: common name=Esi_0005_0190|Esi0005_0190|TrpRS}}
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{{#set: reaction associated=TRYPTOPHAN--TRNA-LIGASE-RXN}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}

Latest revision as of 19:02, 21 March 2018

Gene Ec-08_005870

  • left end position:
    • 5622408
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5634963
  • centisome position:
    • 83.9533
  • Synonym(s):
    • Esi_0005_0190
    • Esi0005_0190
    • TrpRS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_005870&oldid=24011"