Difference between revisions of "FORMYLTHFDEFORMYL-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** caffeine degradation III (bacteria, via demethylation)
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** [http://enzyme.expasy.org/EC/3.5.1.10 EC-3.5.1.10]
 
* Synonym(s):
 
* Synonym(s):
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** caffeine degradation (bacteria)
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[RXN0-901]]
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** 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[THF-GLU-N]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-20_000230]]
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** 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 formate[c] '''+''' 1 a tetrahydrofolate[c]
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*** [[Ec-20_000210]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** [[orthology-aragem]]
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
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* [[XANTHINE-OXIDASE-RXN]]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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** 2 associated gene(s):
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
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*** [[Ec-20_000210]]
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** '''4''' reactions found over '''17''' reactions in the full pathway
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*** [[Ec-20_000230]]
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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** 1 reconstruction source(s) associated:
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** '''8''' reactions found over '''24''' reactions in the full pathway
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11513 RXN-11513]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11516 RXN-11516]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11517 RXN-11517]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11518 RXN-11518]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13106 RXN-13106]
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== External links  ==
 
== External links  ==
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* LIGAND-MAP:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?map00232 map00232]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19833 19833]
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* UM-BBD-PWY : caf
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944]
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{{#set: common name=caffeine degradation III (bacteria, via demethylation)}}
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* UNIPROT:
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{{#set: common name=caffeine degradation (bacteria)}}
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** [http://www.uniprot.org/uniprot/P37051 P37051]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q03432 Q03432]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/Q9PPC9 Q9PPC9]
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{{#set: completion rate=29.0}}
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** [http://www.uniprot.org/uniprot/Q46339 Q46339]
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** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.5.1.10}}
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{{#set: in pathway=PWY-2201|P164-PWY|PWY-5497}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:02, 21 March 2018

Reaction FORMYLTHFDEFORMYL-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an N10-formyl-tetrahydrofolate[c] + 1 H2O[c] => 1 H+[c] + 1 formate[c] + 1 a tetrahydrofolate[c]

Genes associated with this reaction

Pathways

  • PWY-2201, folate transformations I: PWY-2201
    • 12 reactions found over 12 reactions in the full pathway
  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 8 reactions found over 24 reactions in the full pathway

Reconstruction information

External links




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