Difference between revisions of "DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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* common name:
 
* common name:
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** nitrate reduction II (assimilatory)
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** DNA photolyase
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** deoxyribodipyrimidine photo-lyase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
 
* Synonym(s):
 
* Synonym(s):
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** nitrate assimilation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
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** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-01_002720]]
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**
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLUTAMINESYN-RXN]]
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* Gene: [[Ec-01_008100]]
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** 4 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-15_004110]]
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*** Assignment: GO-TERM
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*** [[Ec-21_003610]]
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* Gene: [[Ec-10_005990]]
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*** [[Ec-09_000640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-15_004120]]
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*** Assignment: GO-TERM
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-16_001260]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: GO-TERM
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* [[NITRATE-REDUCTASE-NADH-RXN]]
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* Gene: [[Ec-01_008080]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-10_005740]]
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*** Assignment: GO-TERM
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2763}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
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{{#set: common name=nitrate reduction II (assimilatory)}}
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* UNIPROT:
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{{#set: common name=nitrate assimilation}}
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** [http://www.uniprot.org/uniprot/P12769 P12769]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P12768 P12768]
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** [http://www.uniprot.org/uniprot/P27526 P27526]
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** [http://www.uniprot.org/uniprot/P25078 P25078]
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** [http://www.uniprot.org/uniprot/Q43125 Q43125]
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** [http://www.uniprot.org/uniprot/P40115 P40115]
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** [http://www.uniprot.org/uniprot/Q28811 Q28811]
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** [http://www.uniprot.org/uniprot/Q24443 Q24443]
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** [http://www.uniprot.org/uniprot/Q91186 Q91186]
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** [http://www.uniprot.org/uniprot/Q42696 Q42696]
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** [http://www.uniprot.org/uniprot/P05066 P05066]
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** [http://www.uniprot.org/uniprot/O24020 O24020]
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** [http://www.uniprot.org/uniprot/O24374 O24374]
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** [http://www.uniprot.org/uniprot/P00914 P00914]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=DNA photolyase}}
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{{#set: common name=deoxyribodipyrimidine photo-lyase}}
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{{#set: ec number=EC-4.1.99.3}}
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{{#set: gene associated=Ec-01_008100|Ec-10_005990|Ec-16_001260|Ec-01_008080}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:02, 21 March 2018

Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DNA photolyase
    • deoxyribodipyrimidine photo-lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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