Difference between revisions of "RXN-16094"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16094 RXN-16094] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16094 RXN-16094] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199]
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* common name:
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** [2Fe-2S] iron-sulfur cluster biosynthesis
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* Synonym(s):
 
* Synonym(s):
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** [Fe-S] cluster biosynthesis
 
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** [2Fe-2S] cluster biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''10''' reactions found over '''10''' reactions in the full pathway
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* With identifiers:
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* [[RXN-14381]]
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[CPD-18]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-17346]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 linoleoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 CO2[c] '''+''' 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c]
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14384]]
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== Genes associated with this reaction  ==
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** 3 associated gene(s):
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== Pathways  ==
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*** [[Ec-22_000950]]
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* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
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*** [[Ec-21_005640]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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*** [[Ec-21_003740]]
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* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
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** 1 reconstruction source(s) associated:
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6598]], sciadonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598]
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* [[RXN-14385]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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** 3 associated gene(s):
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== Reconstruction information  ==
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*** [[Ec-21_005640]]
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* Category: [[gap-filling]]
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*** [[Ec-21_003740]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** [[Ec-22_000950]]
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*** Tool: [[meneco]]
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** 1 reconstruction source(s) associated:
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**** Comment: [[added for gapfilling]]
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14386]]
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** 3 associated gene(s):
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*** [[Ec-21_005640]]
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*** [[Ec-21_003740]]
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*** [[Ec-22_000950]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14387]]
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** 2 associated gene(s):
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*** [[Ec-18_000430]]
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*** [[Ec-16_001380]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14388]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14389]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14390]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14391]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-15881]]
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** 3 associated gene(s):
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*** [[Ec-22_000950]]
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*** [[Ec-21_003740]]
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*** [[Ec-21_005640]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-2.3.1.199}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: in pathway=PWY-7601|PWY-7725|PWY-6598}}
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{{#set: common name=[2Fe-2S] iron-sulfur cluster biosynthesis}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: common name=[Fe-S] cluster biosynthesis|[2Fe-2S] cluster biosynthesis}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reaction found=10}}
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{{#set: reconstruction tool=meneco}}
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{{#set: total reaction=10}}
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{{#set: reconstruction comment=added for gapfilling}}
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{{#set: completion rate=100.0}}
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Latest revision as of 19:03, 21 March 2018

Reaction RXN-16094

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 malonyl-CoA[c] + 1 linoleoyl-CoA[c] => 1 coenzyme A[c] + 1 CO2[c] + 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals): PWY-7725
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6598, sciadonate biosynthesis: PWY-6598
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16094&oldid=24131"