Difference between revisions of "1.8.5.1-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-24966 TAX-2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.5.1-RXN 1.8.5.1-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Thioredoxin-like fold *...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.5.1-RXN 1.8.5.1-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-24966 TAX-24966]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-26468 TAX-26468]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4056 TAX-4056]
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* common name:
 
* common name:
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** secologanin and strictosidine biosynthesis
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** Thioredoxin-like fold
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* ec number:
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** [http://enzyme.expasy.org/EC/1.8.5.1 EC-1.8.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''13''' reactions in the full pathway
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* With identifiers:
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* [[STRICTOSIDINE-SYNTHASE-RXN]]
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** 2 [[GLUTATHIONE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''=>''' 1 [[OXIDIZED-GLUTATHIONE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ASCORBATE]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-00_009940]]
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** 2 glutathione[c] '''+''' 1 L-dehydro-ascorbate[c] '''=>''' 1 glutathione disulfide[c] '''+''' 1 H+[c] '''+''' 1 L-ascorbate[c]
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*** [[Ec-14_004550]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Ec-02_003740]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.74-RXN 1.14.13.74-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.3.3.9-RXN 1.3.3.9-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=LOGANATE-O-METHYLTRANSFERASE-RXN LOGANATE-O-METHYLTRANSFERASE-RXN]
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* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12961 RXN-12961]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15237 RXN-15237]
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* [[PWY-2261]], ascorbate glutathione cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2261 PWY-2261]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4521 RXN-4521]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8197 RXN-8197]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8618 RXN-8618]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9371 RXN-9371]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9372 RXN-9372]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9373 RXN-9373]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-24966}}
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* RHEA:
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{{#set: taxonomic range=TAX-26468}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24424 24424]
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{{#set: taxonomic range=TAX-4056}}
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* LIGAND-RXN:
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{{#set: common name=secologanin and strictosidine biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01108 R01108]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=13}}
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** [http://www.uniprot.org/uniprot/Q7M0D1 Q7M0D1]
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{{#set: completion rate=8.0}}
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** [http://www.uniprot.org/uniprot/Q9T2H6 Q9T2H6]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Thioredoxin-like fold}}
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{{#set: ec number=EC-1.8.5.1}}
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{{#set: gene associated=Ec-02_003740}}
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{{#set: in pathway=PWY-6370|PWY-2261}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:05, 21 March 2018

Reaction 1.8.5.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Thioredoxin-like fold
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6370, ascorbate recycling (cytosolic): PWY-6370
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-2261, ascorbate glutathione cycle: PWY-2261
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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