Difference between revisions of "RXN-12959"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-580...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12959 RXN-12959] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12959 RXN-12959] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** phenylpropanoid biosynthesis
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** [http://enzyme.expasy.org/EC/2.7.1.174 EC-2.7.1.174]
 
* Synonym(s):
 
* Synonym(s):
** monolignol biosynthesis
 
** lignin biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''7''' reactions found over '''15''' reactions in the full pathway
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* With identifiers:
* [[4-COUMARATE--COA-LIGASE-RXN]]
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** 1 [[CTP]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c]
** 2 associated gene(s):
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* With common name(s):
*** [[Ec-04_001280]]
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** 1 CTP[c] '''+''' 1 a 1,2-diacyl-sn-glycerol[c] '''=>''' 1 CDP[c] '''+''' 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c]
*** [[Ec-10_001480]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
*** [[orthology-aragem]]
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== Pathways  ==
* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRIGLSYN-PWY TRIGLSYN-PWY]
** 1 associated gene(s):
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** '''7''' reactions found over '''7''' reactions in the full pathway
*** [[Ec-28_003750]]
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== Reconstruction information  ==
** 2 reconstruction source(s) associated:
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* Category: [[annotation]]
*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
*** [[orthology-aragem]]
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*** Tool: [[pathwaytools]]
* [[RXN-1101]]
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** 3 associated gene(s):
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*** [[Ec-12_005240]]
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*** [[Ec-23_001220]]
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*** [[Ec-12_001350]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[RXN-1102]]
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** 1 associated gene(s):
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*** [[Ec-18_002860]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[RXN-1106]]
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** 3 associated gene(s):
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*** [[Ec-12_005240]]
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*** [[Ec-23_001220]]
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*** [[Ec-12_001350]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[RXN-1125]]
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** 1 associated gene(s):
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*** [[Ec-18_002860]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[RXN-1143]]
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** 1 associated gene(s):
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*** [[Ec-01_004720]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.36-RXN 1.14.13.36-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.133-RXN 2.3.1.133-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1142 RXN-1142]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2581 RXN-2581]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2601 RXN-2601]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2602 RXN-2602]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2621 RXN-2621]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2622 RXN-2622]
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== External links  ==
 
== External links  ==
* ARACYC:
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* RHEA:
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-361 PWY-361]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25951 25951]
{{#set: taxonomic range=TAX-58024}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=phenylpropanoid biosynthesis}}
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{{#set: ec number=EC-2.7.1.174}}
{{#set: common name=monolignol biosynthesis|lignin biosynthesis}}
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{{#set: in pathway=TRIGLSYN-PWY}}
{{#set: reaction found=7}}
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{{#set: reconstruction category=annotation}}
{{#set: total reaction=15}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: completion rate=47.0}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:06, 21 March 2018

Reaction RXN-12959

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CTP[c] + 1 a 1,2-diacyl-sn-glycerol[c] => 1 CDP[c] + 1 H+[c] + 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c]

Genes associated with this reaction

Pathways

  • TRIGLSYN-PWY, diacylglycerol and triacylglycerol biosynthesis: TRIGLSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links