Difference between revisions of "Ec-02 005510"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == * direction: ** REVER...")
(Created page with "Category:Gene == Gene Ec-02_005510 == * left end position: ** 5769822 * transcription direction: ** POSITIVE * right end position: ** 5783463 * centisome position: ** 88.3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] ==
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== Gene Ec-02_005510 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 5769822
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* common name:
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* transcription direction:
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** 3-methyl-2-oxobutanoate hydroxymethyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
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** 5783463
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* centisome position:
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** 88.38859   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0082_0007
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** Esi0082_0007
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** LCY
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-8028]]
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** 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''<=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THF-GLU-N]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[RXN-8038]]
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** 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''<=>''' 1 2-dehydropantoate[c] '''+''' 1 a tetrahydrofolate[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-8040]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN1F-147]]
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* [[Ec-01_001700]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN1F-148]]
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***GO-TERM
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* Reaction: [[RXN1F-150]]
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* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-151]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-5947]]
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* [[PWY-5946]]
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* [[PWY-7591]]
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* [[PWY-5943]]
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* [[PWY-5175]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5769822}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11824 11824]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5783463}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
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{{#set: centisome position=88.38859    }}
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* UNIPROT:
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{{#set: common name=Esi_0082_0007|Esi0082_0007|LCY}}
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** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
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{{#set: reaction associated=RXN-8028|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151}}
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** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
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{{#set: pathway associated=PWY-5947|PWY-5946|PWY-7591|PWY-5943|PWY-5175}}
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** [http://www.uniprot.org/uniprot/P31057 P31057]
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** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
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** [http://www.uniprot.org/uniprot/P38122 P38122]
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** [http://www.uniprot.org/uniprot/Q09672 Q09672]
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** [http://www.uniprot.org/uniprot/P52997 P52997]
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** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
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** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
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** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
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** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
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** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-methyl-2-oxobutanoate hydroxymethyltransferase}}
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{{#set: ec number=EC-2.1.2.11}}
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{{#set: gene associated=Ec-01_001700}}
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{{#set: in pathway=PANTO-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:06, 21 March 2018

Gene Ec-02_005510

  • left end position:
    • 5769822
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5783463
  • centisome position:
    • 88.38859
  • Synonym(s):
    • Esi_0082_0007
    • Esi0082_0007
    • LCY

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_005510&oldid=24590"