Difference between revisions of "RXN-646"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12056 RXN-12056] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3.5....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12056 RXN-12056] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.5.1 EC-6.5.1]
+
** [http://enzyme.expasy.org/EC/3.5.1.107 EC-3.5.1.107]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[ATP]][c] '''+''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''=>''' 1 [[ADP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[2-phospho-ligated-tRNA]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[MALEAMATE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[MALEATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 ATP[c] '''+''' 1 a 3' half-tRNA molecule with a hydroxyl on its 5' end[c] '''+''' 1 H2O[c] '''+''' 1 a 5' half-tRNA molecule with a 2',3' cyclic phosphate on its 3' end[c] '''=>''' 1 ADP[c] '''+''' 2 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 a 2'-phospho-[ligated tRNA][c]
+
** 1 H2O[c] '''+''' 1 maleamate[c] '''=>''' 1 ammonium[c] '''+''' 1 maleate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-26_006010]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6689]], tRNA splicing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689]
+
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-722]], nicotinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-722 PWY-722]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5033]], nicotinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5033 PWY-5033]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7128]], nicotine degradation III (VPP pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7128 PWY-7128]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27385 27385]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03540 R03540]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.5.1}}
+
{{#set: ec number=EC-3.5.1.107}}
−
{{#set: in pathway=PWY-6689}}
+
{{#set: gene associated=Ec-26_006010}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PWY-6993|PWY-722|PWY-5033|PWY-7128}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:06, 21 March 2018

Reaction RXN-646

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 maleamate[c] => 1 ammonium[c] + 1 maleate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6993, nicotine degradation II (pyrrolidine pathway): PWY-6993
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-722, nicotinate degradation I: PWY-722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5033, nicotinate degradation II: PWY-5033
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7128, nicotine degradation III (VPP pathway): PWY-7128
    • 1 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-646&oldid=24592"