Difference between revisions of "1.8.4.12-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.12-RXN 1.8.4.12-RXN] == * direction: ** REVERSIBLE * common name: ** peptide-methionine (R)-S...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.12-RXN 1.8.4.12-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** REVERSIBLE
 
* common name:
 
* common name:
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** purine nucleobases degradation I (anaerobic)
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** peptide-methionine (R)-S-oxide reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.8.4.12 EC-1.8.4.12]
 
* Synonym(s):
 
* Synonym(s):
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** purine fermentation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''17''' reactions in the full pathway
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* With identifiers:
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* [[FORMYLTHFDEFORMYL-RXN]]
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** 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Protein-L-methionine]][c] '''<=>''' 1 [[Protein-L-methionine-R-S-oxides]][c] '''+''' 1 [[Red-Thioredoxin]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 an oxidized thioredoxin[c] '''+''' 1 H2O[c] '''+''' 1 a [protein]-L-methionine[c] '''<=>''' 1 a protein-L-methionine-(R)-S-oxide[c] '''+''' 1 a reduced thioredoxin[c]
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*** [[annotation-esiliculosus_genome]]
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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== Genes associated with this reaction  ==
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** 2 associated gene(s):
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-15_001370]]
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* Gene: [[Ec-05_006220]]
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*** [[Ec-14_004070]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: GO-TERM
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-12_004320]]
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* [[RXN-7682]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: GO-TERM
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*** [[Ec-20_000210]]
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* Gene: [[Ec-00_006660]]
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*** [[Ec-20_000230]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Assignment: GO-TERM
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-28_000030]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN0-901]]
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*** Assignment: GO-TERM
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** 2 associated gene(s):
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* Gene: [[Ec-27_006120]]
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*** [[Ec-20_000230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-20_000210]]
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*** Assignment: GO-TERM
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** [[orthology-aragem]]
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* Category: [[annotation]]
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== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.2-RXN 1.2.1.2-RXN]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.4-RXN 4.3.1.4-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-FORMIMINOTRANSFERASE-RXN GLYCINE-FORMIMINOTRANSFERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R127-RXN R127-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R128-RXN R128-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R13-RXN R13-RXN]
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−
* [http://metacyc.org/META/NEW-IMAGE?object=R62-RXN R62-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=R63-RXN R63-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7566 RXN-7566]
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−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8752 RXN-8752]
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−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8755 RXN-8755]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1239}}
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* RHEA:
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{{#set: common name=purine nucleobases degradation I (anaerobic)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24164 24164]
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{{#set: common name=purine fermentation}}
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* LIGAND-RXN:
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{{#set: reaction found=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07607 R07607]
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{{#set: total reaction=17}}
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{{#set: direction=REVERSIBLE}}
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{{#set: completion rate=24.0}}
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{{#set: common name=peptide-methionine (R)-S-oxide reductase}}
 +
{{#set: ec number=EC-1.8.4.12}}
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{{#set: gene associated=Ec-05_006220|Ec-12_004320|Ec-00_006660|Ec-28_000030|Ec-27_006120}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:07, 21 March 2018

Reaction 1.8.4.12-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • peptide-methionine (R)-S-oxide reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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