Difference between revisions of "PWY-5070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** Acetyl-CoA carboxylase, partial
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** gibberellin biosynthesis I (non C-3, non C-13 hydroxylation)
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** acetyl-CoA carboxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.4.1.2 EC-6.4.1.2]
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* Synonym(s):
 
* Synonym(s):
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** gibberellin biosynthesis I (late C-3 hydroxylation)
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** gibberellin biosynthesis I (late C-13 hydroxylation)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''7''' reactions in the full pathway
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** 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[MALONYL-COA]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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* [[RXN1F-162]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 hydrogen carbonate[c] '''+''' 1 ATP[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 malonyl-CoA[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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*** [[Ec-19_002750]]
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*** [[Ec-08_003510]]
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== Genes associated with this reaction  ==
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*** [[Ec-19_002760]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Ec-20_002520]]
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*** [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* [[RXN1F-163]]
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***EC-NUMBER
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** 3 associated gene(s):
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** [[pantograph]]-[[aragem]]
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*** [[Ec-08_003510]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-19_002750]]
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* [[Ec-19_003040]]
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*** [[Ec-19_002760]]
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** ESILICULOSUS_GENOME
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[orthology-aragem]]
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* [[Ec-01_010970]]
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* [[RXN1F-165]]
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** [[pantograph]]-[[aragem]]
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** 3 associated gene(s):
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** [[pantograph]]-[[aragem]]
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*** [[Ec-19_002750]]
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* [[Ec-19_003230]]
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*** [[Ec-19_002760]]
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** ESILICULOSUS_GENOME
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*** [[Ec-08_003510]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[aragem]]
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*** [[orthology-aragem]]
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** [[pantograph]]-[[aragem]]
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== Reaction(s) not found ==
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* [[Ec-14_002460]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6523 RXN-6523]
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** [[pantograph]]-[[aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6541 RXN-6541]
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** [[pantograph]]-[[aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-164 RXN1F-164]
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* [[Ec-01_009720]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-99 RXN1F-99]
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-03_001890]]
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6722]], candicidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6722 PWY-6722]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-6679]], jadomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6679 PWY-6679]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5070 PWY-5070]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742]
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{{#set: common name=gibberellin biosynthesis I (non C-3, non C-13 hydroxylation)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=gibberellin biosynthesis I (late C-3 hydroxylation)|gibberellin biosynthesis I (late C-13 hydroxylation)}}
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{{#set: common name=Acetyl-CoA carboxylase, partial}}
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{{#set: reaction found=3}}
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{{#set: common name=acetyl-CoA carboxylase}}
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{{#set: total reaction=7}}
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{{#set: ec number=EC-6.4.1.2}}
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{{#set: completion rate=43.0}}
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{{#set: gene associated=Ec-20_002520|Ec-19_003040|Ec-01_010970|Ec-19_003230|Ec-14_002460|Ec-01_009720|Ec-03_001890}}
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{{#set: in pathway=PWY-7388|PWY-6722|PWY-5743|PWY-5744|PWY-5789|PWY-6679|PWY-4381}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:08, 21 March 2018

Pathway PWY-5070

  • taxonomic range:
  • common name:
    • gibberellin biosynthesis I (non C-3, non C-13 hydroxylation)
  • Synonym(s):
    • gibberellin biosynthesis I (late C-3 hydroxylation)
    • gibberellin biosynthesis I (late C-13 hydroxylation)

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5070&oldid=24791"