Difference between revisions of "PWY-5135"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phytanoyl-CoA dio...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3481 TAX-34...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3481 TAX-3481]
 
* common name:
 
* common name:
** Phytanoyl-CoA dioxygenase
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** xanthohumol biosynthesis
* ec number:
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** [http://enzyme.expasy.org/EC/1.14.11.18 EC-1.14.11.18]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''4''' reactions in the full pathway
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-206]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[2-HYDROXYPHYTANOYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
* With common name(s):
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** 2 associated gene(s):
** 1 oxygen[c] '''+''' 1 phytanoyl-CoA[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 1 2-hydroxyphytanoyl-CoA[c] '''+''' 1 CO2[c]
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*** [[Ec-10_001480]]
 
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*** [[Ec-04_001280]]
== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
* [[Ec-23_003040]]
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* [[NARINGENIN-CHALCONE-SYNTHASE-RXN]]
** ESILICULOSUS_GENOME
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** 3 associated gene(s):
***AUTOMATED-NAME-MATCH
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*** [[Ec-07_006660]]
* [[Ec-01_001740]]
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*** [[Ec-02_004580]]
** ESILICULOSUS_GENOME
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*** [[Ec-07_003670]]
***AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
* [[Ec-22_003660]]
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*** [[orthology-aragem]]
** ESILICULOSUS_GENOME
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== Reaction(s) not found ==
***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7820 RXN-7820]
* [[Ec-01_011990]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7821 RXN-7821]
** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-3481}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16065 16065]
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{{#set: common name=xanthohumol biosynthesis}}
* LIGAND-RXN:
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{{#set: reaction found=2}}
** [http://www.genome.jp/dbget-bin/www_bget?R05722 R05722]
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{{#set: total reaction=4}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=50.0}}
{{#set: common name=Phytanoyl-CoA dioxygenase}}
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{{#set: ec number=EC-1.14.11.18}}
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{{#set: gene associated=Ec-23_003040|Ec-01_001740|Ec-22_003660|Ec-01_011990}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:08, 21 March 2018

Pathway PWY-5135

  • taxonomic range:
  • common name:
    • xanthohumol biosynthesis
  • Synonym(s):

Reaction(s) found

2 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links