Difference between revisions of "RNA-3-PHOSPHATE-CYCLASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5320 PWY-5320] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3700 TAX-37...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-3-PHOSPHATE-CYCLASE-RXN RNA-3-PHOSPHATE-CYCLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5320 PWY-5320] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-3-PHOSPHATE-CYCLASE-RXN RNA-3-PHOSPHATE-CYCLASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3700 TAX-3700]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** kaempferol glycoside biosynthesis (Arabidopsis)
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** RNA 3'-terminal phosphate cyclase domain
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* ec number:
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** [http://enzyme.expasy.org/EC/6.5.1.4 EC-6.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
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* [[RXN1F-461]]
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** 1 [[3-Prime-Phosphate-Terminated-RNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Cyclic-Phosphate-Terminated-RNAs]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-14_000870]]
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** 1 an RNA 3'-terminal-phosphate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an RNA terminal-2',3'-cyclic-phosphate[c]
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*** [[Ec-04_004610]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Ec-10_001150]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13830 RXN-13830]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14008 RXN-14008]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14009 RXN-14009]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8263 RXN-8263]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8266 RXN-8266]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8270 RXN-8270]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8289 RXN-8289]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-443 RXN1F-443]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-474 RXN1F-474]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-475 RXN1F-475]
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== External links  ==
 
== External links  ==
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* ARACYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5320 PWY-5320]
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** [http://www.genome.jp/dbget-bin/www_bget?R04274 R04274]
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{{#set: taxonomic range=TAX-3700}}
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* UNIPROT:
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{{#set: common name=kaempferol glycoside biosynthesis (Arabidopsis)}}
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** [http://www.uniprot.org/uniprot/Q9V0Z6 Q9V0Z6]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/O00442 O00442]
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{{#set: total reaction=11}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=9.0}}
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{{#set: common name=RNA 3'-terminal phosphate cyclase domain}}
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{{#set: ec number=EC-6.5.1.4}}
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{{#set: gene associated=Ec-10_001150}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:09, 21 March 2018

Reaction RNA-3-PHOSPHATE-CYCLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA 3'-terminal phosphate cyclase domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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