Difference between revisions of "TYRFUMCAT-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 
* common name:
 
* common name:
** glyoxylate cycle
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** L-tyrosine degradation I
 
* Synonym(s):
 
* Synonym(s):
** glyoxylate bypass
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** tyrosine fumarate catabolism
** glyoxylate shunt
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== Reaction(s) found ==
 
== Reaction(s) found ==
  '''6''' reactions found over '''6''' reactions in the full pathway
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  '''3''' reactions found over '''5''' reactions in the full pathway
* [[ACONITATEDEHYDR-RXN]]
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
** 2 associated gene(s):
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*** [[Ec-16_001000]]
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*** [[Ec-12_000170]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[ACONITATEHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-12_000170]]
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*** [[Ec-16_001000]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[CITSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[ISOCIT-CLEAV-RXN]]
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** 1 associated gene(s):
 
** 1 associated gene(s):
*** [[Ec-12_007550]]
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*** [[Ec-23_003630]]
** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_006200]]
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*** [[Ec-02_003100]]
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** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
* [[MALSYN-RXN]]
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* [[HOMOGENTISATE-12-DIOXYGENASE-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
*** [[Ec-12_003860]]
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*** [[Ec-17_003830]]
** 2 reconstruction source(s) associated:
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** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
*** [[orthology-aragem]]
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=FUMARYLACETOACETASE-RXN FUMARYLACETOACETASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=MALEYLACETOACETATE-ISOMERASE-RXN MALEYLACETOACETATE-ISOMERASE-RXN]
 
== External links  ==
 
== External links  ==
* ECOCYC:
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* UM-BBD-PWY : tyr
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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{{#set: taxonomic range=TAX-1224}}
* METACYC:
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{{#set: taxonomic range=TAX-4751}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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{{#set: taxonomic range=TAX-40674}}
{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=L-tyrosine degradation I}}
{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=tyrosine fumarate catabolism}}
{{#set: taxonomic range=TAX-2}}
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{{#set: reaction found=3}}
{{#set: common name=glyoxylate cycle}}
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{{#set: total reaction=5}}
{{#set: common name=glyoxylate bypass|glyoxylate shunt}}
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{{#set: completion rate=60.0}}
{{#set: reaction found=6}}
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{{#set: total reaction=6}}
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{{#set: completion rate=100.0}}
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Latest revision as of 20:09, 21 March 2018

Pathway TYRFUMCAT-PWY

Reaction(s) found

3 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : tyr