Difference between revisions of "UROPORIIIMETHYLTRANSA-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-00_005410 == * left end position: ** 8625886 * transcription direction: ** POSITIVE * right end position: ** 8641939 * centisome position: ** 45.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROPORIIIMETHYLTRANSA-RXN UROPORIIIMETHYLTRANSA-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-00_005410 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROPORIIIMETHYLTRANSA-RXN UROPORIIIMETHYLTRANSA-RXN] ==
−
* left end position:
+
* direction:
−
** 8625886
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Tetrapyrrole methylase, subdomain 2
−
* right end position:
+
−
** 8641939
+
−
* centisome position:
+
−
** 45.52776   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0442_0008
+
** uroporphyrinogen methyltransferase
−
** Esi0442_0008
+
** uroporphyrinogen-III methyltransferase
 +
** adenosylmethionine-uroporphyrinogen III methyltransferase
 +
** S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
 +
** SirA
 +
** CysG
 +
** uroporphyrin-III C-methyltransferase (incorrect)
 +
** S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ARYL-SULFOTRANSFERASE-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 1 [[CPD-9038]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
−
***ec-number
+
* With common name(s):
−
* [[RXN-10614]]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 uroporphyrinogen-III[c] '''=>''' 1 precorrin-1[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
−
** esiliculosus_genome
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
* [[RXN-10615]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** esiliculosus_genome
+
* Gene: [[Ec-06_004170]]
−
***ec-number
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[RXN-10777]]
+
*** Assignment: EC-NUMBER
−
** esiliculosus_genome
+
== Pathways  ==
−
***ec-number
+
* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376]
−
* [[RXN-10782]]
+
** '''2''' reactions found over '''13''' reactions in the full pathway
−
** esiliculosus_genome
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
−
***ec-number
+
** '''3''' reactions found over '''15''' reactions in the full pathway
−
* [[RXN-11058]]
+
* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
−
** esiliculosus_genome
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
***ec-number
+
* [[PWY-5196]], factor 430 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196]
−
* [[RXN-11059]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
** esiliculosus_genome
+
== Reconstruction information  ==
−
***ec-number
+
* Category: [[annotation]]
−
* [[RXN-15587]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** esiliculosus_genome
+
*** Tool: [[pathwaytools]]
−
***ec-number
+
−
* [[RXN-15588]]
+
−
** esiliculosus_genome
+
−
***ec-number
+
−
* [[RXN-15589]]
+
−
** esiliculosus_genome
+
−
***ec-number
+
−
* [[RXN6666-9]]
+
−
** esiliculosus_genome
+
−
***ec-number
+
−
== Pathways associated ==
+
−
* [[PWY6666-2]]
+
−
* [[PWY-6261]]
+
−
* [[PWY-6313]]
+
−
* [[PWY-6398]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=8625886}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19089 19089]
−
{{#set: right end position=8641939}}
+
* LIGAND-RXN:
−
{{#set: centisome position=45.52776    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07237 R07237]
−
{{#set: common name=Esi_0442_0008|Esi0442_0008}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction associated=ARYL-SULFOTRANSFERASE-RXN|RXN-10614|RXN-10615|RXN-10777|RXN-10782|RXN-11058|RXN-11059|RXN-15587|RXN-15588|RXN-15589|RXN6666-9}}
+
{{#set: common name=Tetrapyrrole methylase, subdomain 2}}
−
{{#set: pathway associated=PWY6666-2|PWY-6261|PWY-6313|PWY-6398}}
+
{{#set: common name=uroporphyrinogen methyltransferase|uroporphyrinogen-III methyltransferase|adenosylmethionine-uroporphyrinogen III methyltransferase|S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase|SirA|CysG|uroporphyrin-III C-methyltransferase (incorrect)|S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)}}
 +
{{#set: gene associated=Ec-06_004170}}
 +
{{#set: in pathway=PWY-7376|PWY-7377|PWY-5194|PWY-5196}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:09, 21 March 2018

Reaction UROPORIIIMETHYLTRANSA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tetrapyrrole methylase, subdomain 2
  • Synonym(s):
    • uroporphyrinogen methyltransferase
    • uroporphyrinogen-III methyltransferase
    • adenosylmethionine-uroporphyrinogen III methyltransferase
    • S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
    • SirA
    • CysG
    • uroporphyrin-III C-methyltransferase (incorrect)
    • S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7376, cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): PWY-7376
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): PWY-7377
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-5194, siroheme biosynthesis: PWY-5194
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5196, factor 430 biosynthesis: PWY-5196
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=UROPORIIIMETHYLTRANSA-RXN&oldid=24949"