Difference between revisions of "Ec-16 002990"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.151-RXN 2.4.1.151-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** galactosyltransfera...")
(Created page with "Category:Gene == Gene Ec-16_002990 == * left end position: ** 3167002 * transcription direction: ** NEGATIVE * right end position: ** 3172727 * centisome position: ** 59.3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.151-RXN 2.4.1.151-RXN] ==
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== Gene Ec-16_002990 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3167002
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* common name:
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* transcription direction:
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** galactosyltransferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.87 EC-2.4.1.87]
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** 3172727
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* centisome position:
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** 59.33322   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0030_0075
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** Esi0030_0075
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** PK
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[CPD-14553]][c] '''+''' 1 [[B-Gal-14-NacGlc-R]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL]][c]
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* With common name(s):
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** 1 UDP-α-D-galactose[c] '''+''' 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 α-D-galactosyl-(1,3)-β-D-galactosyl-(1,4)-N-acetyl-D-glucosaminyl-R[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_002280]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-24_000030]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-26_000190]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_006680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-08_004370]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-00_004510]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_005280]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3167002}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13013 13013]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3172727}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02791 R02791]
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{{#set: centisome position=59.33322    }}
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* UNIPROT:
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{{#set: common name=Esi_0030_0075|Esi0030_0075|PK}}
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** [http://www.uniprot.org/uniprot/Q28855 Q28855]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=galactosyltransferase}}
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{{#set: ec number=EC-2.4.1.87}}
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{{#set: gene associated=Ec-03_002280|Ec-24_000030|Ec-26_000190|Ec-01_006680|Ec-08_004370|Ec-00_004510|Ec-14_005280}}
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{{#set: in pathway=PWY-7434}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:10, 21 March 2018

Gene Ec-16_002990

  • left end position:
    • 3167002
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3172727
  • centisome position:
    • 59.33322
  • Synonym(s):
    • Esi_0030_0075
    • Esi0030_0075
    • PK

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_002990&oldid=24996"