Difference between revisions of "Ec-01 010530"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7716 RXN-7716] == * direction: ** REVERSIBLE * common name: ** dihydrolipoamide dehydrogenase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7716 RXN-7716] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** dihydrolipoamide dehydrogenase
+
−
** 2-oxoglutarate dehydrogenase E1 component
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
+
** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-DH-lipoyl]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c]
+
** 1 [[CPD-6994]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-474]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c]
+
** 1 (2S)-eriodictyol[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 (+)-taxifolin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-21_002300]]
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* Gene: [[Ec-19_002760]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
−
***AUTOMATED-NAME-MATCH
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* Gene: [[Ec-08_003510]]
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* [[Ec-25_000020]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Gene: [[Ec-19_002750]]
−
***EC-NUMBER
+
** Source: [[orthology-aragem]]
−
* [[Ec-27_004160]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
+
* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* LIGAND-RXN:
−
{{#set: common name=dihydrolipoamide dehydrogenase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03640 R03640]
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{{#set: common name=2-oxoglutarate dehydrogenase E1 component}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.8.1.4}}
+
{{#set: ec number=EC-1.14.11.9}}
−
{{#set: gene associated=Ec-21_002300|Ec-25_000020|Ec-27_004160}}
+
{{#set: gene associated=Ec-19_002760|Ec-08_003510|Ec-19_002750}}
−
{{#set: in pathway=PWY-5084}}
+
{{#set: in pathway=PWY1F-823|PWY-6787}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Revision as of 13:18, 21 March 2018

Reaction RXN-7775

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-823, leucopelargonidin and leucocyanidin biosynthesis: PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




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