Difference between revisions of "Ec-27 006410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 5'-nucleotidase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[R-3-hydroxystearoyl-ACPs]][c] '''=>''' 1 [[Octadec-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 AMP[c] '''+''' 1 H2O[c] '''=>''' 1 adenosine[c] '''+''' 1 phosphate[c]
+
** 1 a (3R)-3-hydroxystearoyl-[acp][c] '''=>''' 1 a trans-octadec-2-enoyl-[acp][c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-12_005060]]
 
−
** ESILICULOSUS_GENOME
 
−
***GO-TERM
 
−
* [[Ec-05_000950]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-15_000820]]
 
−
** ESILICULOSUS_GENOME
 
−
***GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
+
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[gap-filling]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29375 29375]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00183 R00183]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06196 P06196]
 
−
** [http://www.uniprot.org/uniprot/P21588 P21588]
 
−
** [http://www.uniprot.org/uniprot/O34313 O34313]
 
−
** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
 
−
** [http://www.uniprot.org/uniprot/O29385 O29385]
 
−
** [http://www.uniprot.org/uniprot/P44569 P44569]
 
−
** [http://www.uniprot.org/uniprot/O83142 O83142]
 
−
** [http://www.uniprot.org/uniprot/P49902 P49902]
 
−
** [http://www.uniprot.org/uniprot/P22848 P22848]
 
−
** [http://www.uniprot.org/uniprot/Q05927 Q05927]
 
−
** [http://www.uniprot.org/uniprot/P21589 P21589]
 
−
** [http://www.uniprot.org/uniprot/P29240 P29240]
 
−
** [http://www.uniprot.org/uniprot/P07024 P07024]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=5'-nucleotidase}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: ec number=EC-3.1.3.5}}
+
{{#set: ec number=EC-4.2.1.59}}
−
{{#set: gene associated=Ec-12_005060|Ec-05_000950|Ec-15_000820}}
+
{{#set: in pathway=PWY-5989|PWY3O-355}}
−
{{#set: in pathway=SALVADEHYPOX-PWY}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 14:19, 21 March 2018

Reaction RXN-9634

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5989, stearate biosynthesis II (bacteria and plants): PWY-5989
    • 6 reactions found over 6 reactions in the full pathway
  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_006410&oldid=17553"