Difference between revisions of "PSERPHOSPHA-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5782 TAX-57...")
(Created page with "Category:Gene == Gene Ec-07_003640 == * left end position: ** 3705268 * transcription direction: ** NEGATIVE * right end position: ** 3708474 * centisome position: ** 47.9...")
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[[Category:Pathway]]
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[[Category:Gene]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] ==
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== Gene Ec-07_003640 ==
* taxonomic range:
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* left end position:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5782 TAX-5782]
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** 3705268
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-10239 TAX-10239]
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* transcription direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** NEGATIVE
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* right end position:
* common name:
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** 3708474
** pyrimidine deoxyribonucleotides de novo biosynthesis III
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* centisome position:
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** 47.9806   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0046_0105
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** Esi0046_0105
  
== Reaction(s) found ==
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== Reactions associated ==
'''8''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
* [[CDPREDUCT-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
** 7 associated gene(s):
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*** Assignment: go-term
*** [[Ec-06_005120]]
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== Pathways associated ==
*** [[Ec-11_002170]]
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*** [[Ec-19_000440]]
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*** [[Ec-11_002180]]
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*** [[Ec-21_002920]]
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*** [[Ec-17_003700]]
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*** [[Ec-06_005570]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DCDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-04_001140]]
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*** [[Ec-11_005170]]
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*** [[Ec-03_001380]]
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*** [[Ec-26_003930]]
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*** [[Ec-07_000140]]
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*** [[Ec-22_003280]]
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*** [[Ec-11_004330]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-26_003930]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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*** [[Ec-22_003280]]
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*** [[Ec-11_005170]]
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*** [[Ec-03_001380]]
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*** [[Ec-07_000140]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
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*** [[Ec-20_004950]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[DUDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-11_005170]]
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*** [[Ec-11_004330]]
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*** [[Ec-03_001380]]
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*** [[Ec-04_001140]]
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*** [[Ec-07_000140]]
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*** [[Ec-22_003280]]
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*** [[Ec-26_003930]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DUTP-PYROP-RXN]]
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** 1 associated gene(s):
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*** [[Ec-13_002810]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-12195]]
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** 9 associated gene(s):
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*** [[Ec-02_005730]]
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*** [[Ec-03_001180]]
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*** [[Ec-05_005340]]
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*** [[Ec-18_004660]]
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*** [[Ec-06_005470]]
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*** [[Ec-01_003690]]
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*** [[Ec-17_000870]]
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*** [[Ec-28_000420]]
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*** [[Ec-03_004860]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[UDPREDUCT-RXN]]
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** 7 associated gene(s):
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*** [[Ec-19_000440]]
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*** [[Ec-21_002920]]
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*** [[Ec-17_003700]]
+
*** [[Ec-11_002180]]
+
*** [[Ec-06_005120]]
+
*** [[Ec-06_005570]]
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*** [[Ec-11_002170]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8850 RXN-8850]
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== External links  ==
 
== External links  ==
* LIGAND-MAP:
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{{#set: left end position=3705268}}
** [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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{{#set: transcription direction=NEGATIVE}}
{{#set: taxonomic range=TAX-5782}}
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{{#set: right end position=3708474}}
{{#set: taxonomic range=TAX-10239}}
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{{#set: centisome position=47.9806    }}
{{#set: taxonomic range=TAX-2}}
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{{#set: common name=Esi_0046_0105|Esi0046_0105}}
{{#set: taxonomic range=TAX-2157}}
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis III}}
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{{#set: reaction found=8}}
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{{#set: total reaction=9}}
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{{#set: completion rate=89.0}}
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Revision as of 14:19, 21 March 2018

Gene Ec-07_003640

  • left end position:
    • 3705268
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3708474
  • centisome position:
    • 47.9806
  • Synonym(s):
    • Esi_0046_0105
    • Esi0046_0105

Reactions associated

Pathways associated

External links