Difference between revisions of "PWY-5690"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDYLPROLYL-ISOMERASE-RXN PEPTIDYLPROLYL-ISOMERASE-RXN] == * direction: ** REVERSIBLE * common n...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDYLPROLYL-ISOMERASE-RXN PEPTIDYLPROLYL-ISOMERASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] ==
* direction:
+
* taxonomic range:
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** Peptidyl-prolyl cis-trans isomerase, FKBP-type
+
** sucrose biosynthesis II
** peptidyl-prolyl cis-trans isomerase
+
** FKBP-type peptidyl-prolyl cis-trans isomerase
+
** Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
+
** WW domain
+
** immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein
+
** peptidyl-prolyl cis-trans isomerase 1
+
** Peptidyl-prolyl cis-trans isomerase, PpiC-type
+
** Cyclophilin-like domain
+
* ec number:
+
** [http://enzyme.expasy.org/EC/5.2.1.8 EC-5.2.1.8]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** sucrose biosynthesis II (from starch degradation intermediates)
 +
** sucrose biosynthesis II (plant cytosol)
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''4''' reactions found over '''8''' reactions in the full pathway
** 1 [[CPD-8624]][c] '''<=>''' 1 [[CPD-8625]][c]
+
* [[GLUC1PURIDYLTRANS-RXN]]
* With common name(s):
+
** 4 associated gene(s):
** 1 a [protein]-L-proline (&omega; = 180)[c] '''<=>''' 1 a [protein]-L-proline (&omega; = 0)[c]
+
*** [[Ec-03_002030]]
 
+
*** [[Ec-12_002300]]
== Genes associated with this reaction  ==
+
*** [[Ec-16_004100]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Ec-05_002180]]
* [[Ec-15_002210]]
+
** 2 reconstruction source(s) associated:
** ESILICULOSUS_GENOME
+
*** [[annotation-esiliculosus_genome]]
***AUTOMATED-NAME-MATCH
+
*** [[orthology-aragem]]
* [[Ec-04_005600]]
+
* [[GLUCOKIN-RXN]]
** ESILICULOSUS_GENOME
+
** 1 associated gene(s):
***GO-TERM
+
*** [[Ec-27_005030]]
* [[Ec-21_005550]]
+
** 1 reconstruction source(s) associated:
** ESILICULOSUS_GENOME
+
*** [[annotation-esiliculosus_genome]]
***GO-TERM
+
* [[PGLUCISOM-RXN]]
* [[Ec-17_002500]]
+
** 3 associated gene(s):
** ESILICULOSUS_GENOME
+
*** [[Ec-24_002470]]
***EC-NUMBER
+
*** [[Ec-13_003530]]
* [[Ec-23_003510]]
+
*** [[Ec-13_003810]]
** ESILICULOSUS_GENOME
+
** 1 reconstruction source(s) associated:
***GO-TERM
+
*** [[annotation-esiliculosus_genome]]
* [[Ec-03_003770]]
+
* [[PHOSPHOGLUCMUT-RXN]]
** ESILICULOSUS_GENOME
+
** 1 associated gene(s):
***GO-TERM
+
*** [[Ec-17_001480]]
* [[Ec-09_002840]]
+
** 1 reconstruction source(s) associated:
** ESILICULOSUS_GENOME
+
*** [[annotation-esiliculosus_genome]]
***EC-NUMBER
+
== Reaction(s) not found ==
* [[Ec-05_001980]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14353 RXN-14353]
** ESILICULOSUS_GENOME
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14354 RXN-14354]
***AUTOMATED-NAME-MATCH
+
* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
* [[Ec-17_002700]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN]
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-01_003910]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-08_001300]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-19_001050]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-08_000710]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-15_002640]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-12_001720]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-01_006400]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-18_000770]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-07_005110]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-02_005120]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-01_003190]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-06_002180]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-21_005540]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-04_003010]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-11_003150]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-20_000240]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-00_007940]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-21_001540]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-08_004100]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-06_010450]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-01_003590]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-07_006150]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-17_000400]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-06_010460]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-27_003120]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-11_005860]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-13_001310]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-23_002000]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-14_002740]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-14_000380]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-07_000740]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-22_000860]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-22_002640]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-04_005350]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-26_000140]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-12_002280]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-12_005100]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-21_005670]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-07_004980]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-09_001710]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-24_001370]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-08_001030]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-23_001830]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-04_002010]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
== Pathways  ==
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
** Source: [[annotation-esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33090}}
** [http://www.genome.jp/dbget-bin/www_bget?R04273 R04273]
+
{{#set: common name=sucrose biosynthesis II}}
* UNIPROT:
+
{{#set: common name=sucrose biosynthesis II (from starch degradation intermediates)|sucrose biosynthesis II (plant cytosol)}}
** [http://www.uniprot.org/uniprot/P20081 P20081]
+
{{#set: reaction found=4}}
** [http://www.uniprot.org/uniprot/P62942 P62942]
+
{{#set: total reaction=8}}
** [http://www.uniprot.org/uniprot/P30412 P30412]
+
{{#set: completion rate=50.0}}
** [http://www.uniprot.org/uniprot/P24367 P24367]
+
** [http://www.uniprot.org/uniprot/P30405 P30405]
+
** [http://www.uniprot.org/uniprot/P28725 P28725]
+
** [http://www.uniprot.org/uniprot/P14088 P14088]
+
** [http://www.uniprot.org/uniprot/Q08752 Q08752]
+
** [http://www.uniprot.org/uniprot/Q26994 Q26994]
+
** [http://www.uniprot.org/uniprot/P45877 P45877]
+
** [http://www.uniprot.org/uniprot/Q9DCY1 Q9DCY1]
+
** [http://www.uniprot.org/uniprot/P18203 P18203]
+
** [http://www.uniprot.org/uniprot/O25982 O25982]
+
** [http://www.uniprot.org/uniprot/O66105 O66105]
+
** [http://www.uniprot.org/uniprot/Q9ZL49 Q9ZL49]
+
** [http://www.uniprot.org/uniprot/P25007 P25007]
+
** [http://www.uniprot.org/uniprot/Q9UDK1 Q9UDK1]
+
** [http://www.uniprot.org/uniprot/P34791 P34791]
+
** [http://www.uniprot.org/uniprot/Q9ZCB7 Q9ZCB7]
+
** [http://www.uniprot.org/uniprot/P44837 P44837]
+
** [http://www.uniprot.org/uniprot/P47480 P47480]
+
** [http://www.uniprot.org/uniprot/P56420 P56420]
+
** [http://www.uniprot.org/uniprot/P62935 P62935]
+
** [http://www.uniprot.org/uniprot/P14832 P14832]
+
** [http://www.uniprot.org/uniprot/P25334 P25334]
+
** [http://www.uniprot.org/uniprot/P22011 P22011]
+
** [http://www.uniprot.org/uniprot/P0AFL3 P0AFL3]
+
** [http://www.uniprot.org/uniprot/P23869 P23869]
+
** [http://www.uniprot.org/uniprot/P62937 P62937]
+
** [http://www.uniprot.org/uniprot/P23284 P23284]
+
** [http://www.uniprot.org/uniprot/P17742 P17742]
+
** [http://www.uniprot.org/uniprot/P10255 P10255]
+
** [http://www.uniprot.org/uniprot/P62936 P62936]
+
** [http://www.uniprot.org/uniprot/P24525 P24525]
+
** [http://www.uniprot.org/uniprot/P10111 P10111]
+
** [http://www.uniprot.org/uniprot/P21568 P21568]
+
** [http://www.uniprot.org/uniprot/P29820 P29820]
+
** [http://www.uniprot.org/uniprot/P21569 P21569]
+
** [http://www.uniprot.org/uniprot/P18253 P18253]
+
** [http://www.uniprot.org/uniprot/P15425 P15425]
+
** [http://www.uniprot.org/uniprot/P44499 P44499]
+
** [http://www.uniprot.org/uniprot/P44830 P44830]
+
** [http://www.uniprot.org/uniprot/P0A850 P0A850]
+
** [http://www.uniprot.org/uniprot/Q9ZJH5 Q9ZJH5]
+
** [http://www.uniprot.org/uniprot/P0ABZ6 P0ABZ6]
+
** [http://www.uniprot.org/uniprot/Q9RXR9 Q9RXR9]
+
** [http://www.uniprot.org/uniprot/Q9PNC4 Q9PNC4]
+
** [http://www.uniprot.org/uniprot/P56989 P56989]
+
** [http://www.uniprot.org/uniprot/P80698 P80698]
+
** [http://www.uniprot.org/uniprot/Q9RRF0 Q9RRF0]
+
** [http://www.uniprot.org/uniprot/Q9JQS5 Q9JQS5]
+
** [http://www.uniprot.org/uniprot/Q57726 Q57726]
+
** [http://www.uniprot.org/uniprot/P65762 P65762]
+
** [http://www.uniprot.org/uniprot/O27393 O27393]
+
** [http://www.uniprot.org/uniprot/Q9JZ74 Q9JZ74]
+
** [http://www.uniprot.org/uniprot/Q46108 Q46108]
+
** [http://www.uniprot.org/uniprot/Q9JU68 Q9JU68]
+
** [http://www.uniprot.org/uniprot/Q9JUB5 Q9JUB5]
+
** [http://www.uniprot.org/uniprot/P42458 P42458]
+
** [http://www.uniprot.org/uniprot/P68106 P68106]
+
** [http://www.uniprot.org/uniprot/Q9QUR7 Q9QUR7]
+
** [http://www.uniprot.org/uniprot/P0AEM0 P0AEM0]
+
** [http://www.uniprot.org/uniprot/Q00688 Q00688]
+
** [http://www.uniprot.org/uniprot/Q7M511 Q7M511]
+
** [http://www.uniprot.org/uniprot/P30404 P30404]
+
** [http://www.uniprot.org/uniprot/Q7M541 Q7M541]
+
** [http://www.uniprot.org/uniprot/P23285 P23285]
+
** [http://www.uniprot.org/uniprot/P35627 P35627]
+
** [http://www.uniprot.org/uniprot/P29117 P29117]
+
** [http://www.uniprot.org/uniprot/P32472 P32472]
+
** [http://www.uniprot.org/uniprot/Q06118 Q06118]
+
** [http://www.uniprot.org/uniprot/P25719 P25719]
+
** [http://www.uniprot.org/uniprot/P35176 P35176]
+
** [http://www.uniprot.org/uniprot/Q40493 Q40493]
+
** [http://www.uniprot.org/uniprot/P35137 P35137]
+
** [http://www.uniprot.org/uniprot/Q53919 Q53919]
+
** [http://www.uniprot.org/uniprot/Q40673 Q40673]
+
** [http://www.uniprot.org/uniprot/Q40672 Q40672]
+
** [http://www.uniprot.org/uniprot/P38911 P38911]
+
** [http://www.uniprot.org/uniprot/P0A9L5 P0A9L5]
+
** [http://www.uniprot.org/uniprot/Q48822 Q48822]
+
** [http://www.uniprot.org/uniprot/Q42406 Q42406]
+
** [http://www.uniprot.org/uniprot/P42693 P42693]
+
** [http://www.uniprot.org/uniprot/Q99008 Q99008]
+
** [http://www.uniprot.org/uniprot/Q8IIK8 Q8IIK8]
+
** [http://www.uniprot.org/uniprot/Q27745 Q27745]
+
** [http://www.uniprot.org/uniprot/Q41119 Q41119]
+
** [http://www.uniprot.org/uniprot/Q43207 Q43207]
+
** [http://www.uniprot.org/uniprot/Q06205 Q06205]
+
** [http://www.uniprot.org/uniprot/Q8XCI0 Q8XCI0]
+
** [http://www.uniprot.org/uniprot/P54985 P54985]
+
** [http://www.uniprot.org/uniprot/Q9UNP9 Q9UNP9]
+
** [http://www.uniprot.org/uniprot/Q7M0B2 Q7M0B2]
+
** [http://www.uniprot.org/uniprot/Q10724 Q10724]
+
** [http://www.uniprot.org/uniprot/Q38900 Q38900]
+
** [http://www.uniprot.org/uniprot/Q38936 Q38936]
+
** [http://www.uniprot.org/uniprot/Q38931 Q38931]
+
** [http://www.uniprot.org/uniprot/P75454 P75454]
+
** [http://www.uniprot.org/uniprot/P73789 P73789]
+
** [http://www.uniprot.org/uniprot/Q8LDP4 Q8LDP4]
+
** [http://www.uniprot.org/uniprot/Q25340 Q25340]
+
** [http://www.uniprot.org/uniprot/O68129 O68129]
+
** [http://www.uniprot.org/uniprot/O49605 O49605]
+
** [http://www.uniprot.org/uniprot/P34790 P34790]
+
** [http://www.uniprot.org/uniprot/O04843 O04843]
+
** [http://www.uniprot.org/uniprot/O65104 O65104]
+
** [http://www.uniprot.org/uniprot/Q39613 Q39613]
+
** [http://www.uniprot.org/uniprot/Q41649 Q41649]
+
** [http://www.uniprot.org/uniprot/Q41651 Q41651]
+
** [http://www.uniprot.org/uniprot/P52014 P52014]
+
** [http://www.uniprot.org/uniprot/P52017 P52017]
+
** [http://www.uniprot.org/uniprot/P52018 P52018]
+
** [http://www.uniprot.org/uniprot/P52013 P52013]
+
** [http://www.uniprot.org/uniprot/Q9XXI7 Q9XXI7]
+
** [http://www.uniprot.org/uniprot/P52009 P52009]
+
** [http://www.uniprot.org/uniprot/P52015 P52015]
+
** [http://www.uniprot.org/uniprot/P52011 P52011]
+
** [http://www.uniprot.org/uniprot/Q18445 Q18445]
+
** [http://www.uniprot.org/uniprot/O54168 O54168]
+
** [http://www.uniprot.org/uniprot/Q9XA08 Q9XA08]
+
** [http://www.uniprot.org/uniprot/P87051 P87051]
+
** [http://www.uniprot.org/uniprot/O74729 O74729]
+
** [http://www.uniprot.org/uniprot/O94273 O94273]
+
** [http://www.uniprot.org/uniprot/O50586 O50586]
+
** [http://www.uniprot.org/uniprot/O93778 O93778]
+
** [http://www.uniprot.org/uniprot/Q38867 Q38867]
+
** [http://www.uniprot.org/uniprot/Q9LY53 Q9LY53]
+
** [http://www.uniprot.org/uniprot/Q96416 Q96416]
+
** [http://www.uniprot.org/uniprot/Q96417 Q96417]
+
** [http://www.uniprot.org/uniprot/O64456 O64456]
+
** [http://www.uniprot.org/uniprot/Q9XF12 Q9XF12]
+
** [http://www.uniprot.org/uniprot/Q9SKQ0 Q9SKQ0]
+
** [http://www.uniprot.org/uniprot/Q9SP02 Q9SP02]
+
** [http://www.uniprot.org/uniprot/P77949 P77949]
+
** [http://www.uniprot.org/uniprot/O23727 O23727]
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Peptidyl-prolyl cis-trans isomerase, FKBP-type}}
+
{{#set: common name=peptidyl-prolyl cis-trans isomerase}}
+
{{#set: common name=FKBP-type peptidyl-prolyl cis-trans isomerase}}
+
{{#set: common name=Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain}}
+
{{#set: common name=WW domain}}
+
{{#set: common name=immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein}}
+
{{#set: common name=peptidyl-prolyl cis-trans isomerase 1}}
+
{{#set: common name=Peptidyl-prolyl cis-trans isomerase, PpiC-type}}
+
{{#set: common name=Cyclophilin-like domain}}
+
{{#set: ec number=EC-5.2.1.8}}
+
{{#set: gene associated=Ec-15_002210|Ec-04_005600|Ec-21_005550|Ec-17_002500|Ec-23_003510|Ec-03_003770|Ec-09_002840|Ec-05_001980|Ec-17_002700|Ec-01_003910|Ec-08_001300|Ec-19_001050|Ec-08_000710|Ec-15_002640|Ec-12_001720|Ec-01_006400|Ec-18_000770|Ec-07_005110|Ec-02_005120|Ec-01_003190|Ec-06_002180|Ec-21_005540|Ec-04_003010|Ec-11_003150|Ec-20_000240|Ec-00_007940|Ec-21_001540|Ec-08_004100|Ec-06_010450|Ec-01_003590|Ec-07_006150|Ec-17_000400|Ec-06_010460|Ec-27_003120|Ec-11_005860|Ec-13_001310|Ec-23_002000|Ec-14_002740|Ec-14_000380|Ec-07_000740|Ec-22_000860|Ec-22_002640|Ec-04_005350|Ec-26_000140|Ec-12_002280|Ec-12_005100|Ec-21_005670|Ec-07_004980|Ec-09_001710|Ec-24_001370|Ec-08_001030|Ec-23_001830|Ec-04_002010}}
+
{{#set: in pathway=}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:19, 21 March 2018

Pathway PWY-7238

  • taxonomic range:
  • common name:
    • sucrose biosynthesis II
  • Synonym(s):
    • sucrose biosynthesis II (from starch degradation intermediates)
    • sucrose biosynthesis II (plant cytosol)

Reaction(s) found

4 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links