Difference between revisions of "PWY-6430"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] == * direction: ** LEFT-TO-RIGHT * common name: ** DNA glycosylase ** DNA-(apu...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPCARBTRANS-RXN ASPCARBTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** Aspartate carbam...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPCARBTRANS-RXN ASPCARBTRANS-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** DNA glycosylase
+
** Aspartate carbamoyltransferase
−
** DNA-(apurinic or apyrimidinic site) lyase
+
** Aspartate/ornithine carbamoyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.99.18 EC-4.2.99.18]
+
** [http://enzyme.expasy.org/EC/2.1.3.2 EC-2.1.3.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Damaged-DNA-Pyrimidine]][c] '''=>''' 1 [[DNA-containing-a-Apyrimidinic-Sites]][c]
+
** 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a damaged DNA pyrimidine[c] '''=>''' 1 a DNA containing an apyrimidinic site[c]
+
** 1 carbamoyl phosphate[c] '''+''' 1 L-aspartate[c] '''<=>''' 1 N-carbamoyl-L-aspartate[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-18_003720]]
+
* Gene: [[Ec-00_004630]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-01_006350]]
+
* Gene: [[Ec-07_003480]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
−
* [[Ec-00_001490]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-16_004990]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-19_001460]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5686]], UMP biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=DNA glycosylase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20013 20013]
−
{{#set: common name=DNA-(apurinic or apyrimidinic site) lyase}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-4.2.99.18}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01397 R01397]
−
{{#set: gene associated=Ec-18_003720|Ec-01_006350|Ec-00_001490|Ec-16_004990|Ec-19_001460}}
+
* UNIPROT:
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/P08955 P08955]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P27708 P27708]
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
** [http://www.uniprot.org/uniprot/Q04595 Q04595]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q59711 Q59711]
 +
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
 +
** [http://www.uniprot.org/uniprot/P65616 P65616]
 +
** [http://www.uniprot.org/uniprot/Q59712 Q59712]
 +
** [http://www.uniprot.org/uniprot/Q9CF79 Q9CF79]
 +
** [http://www.uniprot.org/uniprot/Q58976 Q58976]
 +
** [http://www.uniprot.org/uniprot/P08421 P08421]
 +
** [http://www.uniprot.org/uniprot/P0A786 P0A786]
 +
** [http://www.uniprot.org/uniprot/P0A7F3 P0A7F3]
 +
** [http://www.uniprot.org/uniprot/P19936 P19936]
 +
** [http://www.uniprot.org/uniprot/Q58801 Q58801]
 +
** [http://www.uniprot.org/uniprot/Q9PNJ6 Q9PNJ6]
 +
** [http://www.uniprot.org/uniprot/P05654 P05654]
 +
** [http://www.uniprot.org/uniprot/P0A1Z4 P0A1Z4]
 +
** [http://www.uniprot.org/uniprot/P19910 P19910]
 +
** [http://www.uniprot.org/uniprot/P07259 P07259]
 +
** [http://www.uniprot.org/uniprot/P20054 P20054]
 +
** [http://www.uniprot.org/uniprot/P05990 P05990]
 +
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
 +
** [http://www.uniprot.org/uniprot/Q09027 Q09027]
 +
** [http://www.uniprot.org/uniprot/P49077 P49077]
 +
** [http://www.uniprot.org/uniprot/Q9S983 Q9S983]
 +
** [http://www.uniprot.org/uniprot/Q09794 Q09794]
 +
** [http://www.uniprot.org/uniprot/P74163 P74163]
 +
** [http://www.uniprot.org/uniprot/Q43064 Q43064]
 +
** [http://www.uniprot.org/uniprot/Q43086 Q43086]
 +
** [http://www.uniprot.org/uniprot/Q43087 Q43087]
 +
** [http://www.uniprot.org/uniprot/Q84493 Q84493]
 +
** [http://www.uniprot.org/uniprot/Q9UAH8 Q9UAH8]
 +
** [http://www.uniprot.org/uniprot/Q60252 Q60252]
 +
** [http://www.uniprot.org/uniprot/P96174 P96174]
 +
** [http://www.uniprot.org/uniprot/P96175 P96175]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Aspartate carbamoyltransferase}}
 +
{{#set: common name=Aspartate/ornithine carbamoyltransferase}}
 +
{{#set: ec number=EC-2.1.3.2}}
 +
{{#set: gene associated=Ec-00_004630|Ec-07_003480}}
 +
{{#set: in pathway=PWY-5686}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:19, 21 March 2018

Reaction ASPCARBTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Aspartate carbamoyltransferase
    • Aspartate/ornithine carbamoyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5686, UMP biosynthesis: PWY-5686
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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