Difference between revisions of "Ec-07 003080"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** octanoyl-CoA ligase ** long c...")
(Created page with "Category:Gene == Gene Ec-24_004340 == * left end position: ** 4838735 * transcription direction: ** NEGATIVE * right end position: ** 4849164 * centisome position: ** 97.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] ==
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== Gene Ec-24_004340 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4838735
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* common name:
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* transcription direction:
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** octanoyl-CoA ligase
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** NEGATIVE
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** long chain acyl-coA synthetase
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* right end position:
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** long chain acyl-CoA synthetase
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** 4849164
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 97.01390   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0243_0016
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** Esi0243_0016
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-195]][c] '''=>''' 1 [[CPD-196]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* With common name(s):
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 octanoate[c] '''=>''' 1 octanoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_003710]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-12_008720]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-01_001560]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-02_006430]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[P221-PWY]], octane oxidation: [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4838735}}
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{{#set: common name=octanoyl-CoA ligase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: right end position=4849164}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: centisome position=97.01390    }}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Esi_0243_0016|Esi0243_0016}}
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{{#set: gene associated=Ec-03_003710|Ec-12_008720|Ec-01_001560|Ec-02_006430}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: in pathway=PWY-6920|P221-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:21, 21 March 2018

Gene Ec-24_004340

  • left end position:
    • 4838735
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4849164
  • centisome position:
    • 97.01390
  • Synonym(s):
    • Esi_0243_0016
    • Esi0243_0016

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_003080&oldid=17870"