Difference between revisions of "Cis-delta9-3-hydroxymontanoyl-ACPs"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] == * direction: ** REVERSIBL...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** REVERSIBLE
 
* common name:
 
* common name:
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** all-trans-farnesol biosynthesis
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** branched-chain-amino-acid transaminase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.6 EC-2.6.1.6]
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** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
 
* Synonym(s):
 
* Synonym(s):
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** trans,trans-farnesol biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[FPPSYN-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-07_006170]]
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** 1 2-oxoglutarate[c] '''+''' 1 L-leucine[c] '''<=>''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 L-glutamate[c]
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*** [[Ec-10_003020]]
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*** [[Ec-16_004330]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-12_005560]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[GPPSYN-RXN]]
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*** Assignment: GO-TERM
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** 12 associated gene(s):
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* Gene: [[Ec-20_001390]]
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*** [[Ec-07_006170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-16_004330]]
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*** Assignment: GO-TERM
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*** [[Ec-08_002270]]
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* Gene: [[Ec-12_005530]]
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*** [[Ec-10_003020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-00_007350]]
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*** Assignment: GO-TERM
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*** [[Ec-14_006550]]
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* Gene: [[Ec-12_005520]]
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*** [[Ec-24_003910]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_003280]]
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*** Assignment: GO-TERM
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*** [[Ec-21_000990]]
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== Pathways  ==
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*** [[Ec-25_002110]]
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* [[PWY-5076]], L-leucine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076]
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*** [[Ec-17_001240]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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*** [[Ec-18_000990]]
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* [[PWY-7767]], leucine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7767 PWY-7767]
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** 2 reconstruction source(s) associated:
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** '''1''' reactions found over '''5''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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*** [[orthology-aragem]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[IPPISOM-RXN]]
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** 2 associated gene(s):
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** '''6''' reactions found over '''6''' reactions in the full pathway
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*** [[Ec-11_001030]]
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== Reconstruction information  ==
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*** [[Ec-18_002690]]
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* Category: [[annotation]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-aragem]]
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−
== Reaction(s) not found ==
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−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8617 RXN-8617]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* RHEA:
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{{#set: common name=all-trans-farnesol biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18321 18321]
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{{#set: common name=trans,trans-farnesol biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
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{{#set: total reaction=4}}
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* UNIPROT:
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{{#set: completion rate=75.0}}
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=branched-chain-amino-acid transaminase}}
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{{#set: ec number=EC-2.6.1.6}}
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{{#set: ec number=EC-2.6.1.42}}
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{{#set: gene associated=Ec-12_005560|Ec-20_001390|Ec-12_005530|Ec-12_005520}}
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{{#set: in pathway=PWY-5076|PWY-7767|LEU-DEG2-PWY|LEUSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:22, 21 March 2018

Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • branched-chain-amino-acid transaminase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-oxoglutarate[c] + 1 L-leucine[c] <=> 1 4-methyl-2-oxopentanoate[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5076, L-leucine degradation III: PWY-5076
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7767, leucine degradation IV: PWY-7767
    • 1 reactions found over 5 reactions in the full pathway
  • LEU-DEG2-PWY, L-leucine degradation I: LEU-DEG2-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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