Difference between revisions of "Oxo-glutarate-dehydro-suc-DH-lipoyl"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2561 RXN-2561] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/5....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2561 RXN-2561] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Aminotransferase, class I/classII
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.50 EC-2.3.1.50]
+
** [http://enzyme.expasy.org/EC/5.5.1.24 EC-5.5.1.24]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c]
+
** 1 [[MPBQ]][c] '''=>''' 1 [[DELTA-TOCOPHEROL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 palmitoyl-CoA[c] '''+''' 1 L-serine[c] '''=>''' 1 CO2[c] '''+''' 1 coenzyme A[c] '''+''' 1 3-dehydrosphinganine[c]
+
** 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''=>''' 1 δ-tocopherol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-11_004190]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-24_002690]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
+
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
−
** '''1''' reactions found over '''13''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
+
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14761 14761]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01281 R01281]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07503 R07503]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P25045 P25045]
+
−
** [http://www.uniprot.org/uniprot/O15270 O15270]
+
−
** [http://www.uniprot.org/uniprot/P48241 P48241]
+
−
** [http://www.uniprot.org/uniprot/Q09925 Q09925]
+
−
** [http://www.uniprot.org/uniprot/P40970 P40970]
+
−
** [http://www.uniprot.org/uniprot/Q9XVI6 Q9XVI6]
+
−
** [http://www.uniprot.org/uniprot/Q20375 Q20375]
+
−
** [http://www.uniprot.org/uniprot/Q9M304 Q9M304]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aminotransferase, class I/classII}}
+
{{#set: ec number=EC-5.5.1.24}}
−
{{#set: ec number=EC-2.3.1.50}}
+
{{#set: in pathway=PWY-1422}}
−
{{#set: gene associated=Ec-11_004190|Ec-24_002690}}
+
−
{{#set: in pathway=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:23, 17 March 2018

Reaction RXN-2561

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-methyl-6-phytyl-1,4-benzoquinol[c] => 1 δ-tocopherol[c]

Genes associated with this reaction

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




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