Difference between revisions of "RXN-16132"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16226 RXN-16226] == * direction: ** LEFT-TO-RIGHT * common name: ** Sulfatase-modifying factor...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** KDPG/KHG aldolase *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16226 RXN-16226] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Sulfatase-modifying factor 2 precursor
+
** KDPG/KHG aldolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.3.b EC-1.8.3.b]
+
** [http://enzyme.expasy.org/EC/4.1.2.55 EC-4.1.2.55]
 +
** [http://enzyme.expasy.org/EC/4.1.2.14 EC-4.1.2.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Sulfatase-L-cysteine]][c] '''+''' 2 [[Thiols]][c] '''=>''' 1 [[Protein-formylglycine]][c] '''+''' 1 [[HS]][c] '''+''' 1 [[Disulfides]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[2-KETO-3-DEOXY-6-P-GLUCONATE]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 a [sulfatase]-L-cysteine[c] '''+''' 2 a thiol[c] '''=>''' 1 a [sulfatase]-3-oxo-L-alanine[c] '''+''' 1 hydrogen sulfide[c] '''+''' 1 a disulfide[c] '''+''' 1 H2O[c]
+
** 1 2-dehydro-3-deoxy-D-gluconate 6-phosphate[c] '''=>''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-20_001020]]
+
* Gene: [[Ec-27_004070]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7310]], D-glucosaminate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7310 PWY-7310]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6507]], 4-deoxy-L-threo-hex-4-enopyranuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[ENTNER-DOUDOROFF-PWY]], Entner-Doudoroff pathway I: [http://metacyc.org/META/NEW-IMAGE?object=ENTNER-DOUDOROFF-PWY ENTNER-DOUDOROFF-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7562]], 3,6-anhydro-α-L-galactopyranose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7562 PWY-7562]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17089 17089]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05605 R05605]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P44480 P44480]
 +
** [http://www.uniprot.org/uniprot/P0A955 P0A955]
 +
** [http://www.uniprot.org/uniprot/P00885 P00885]
 +
** [http://www.uniprot.org/uniprot/Q9JR44 Q9JR44]
 +
** [http://www.uniprot.org/uniprot/O25729 O25729]
 +
** [http://www.uniprot.org/uniprot/Q9ZKB4 Q9ZKB4]
 +
** [http://www.uniprot.org/uniprot/O83578 O83578]
 +
** [http://www.uniprot.org/uniprot/Q9WXS1 Q9WXS1]
 +
** [http://www.uniprot.org/uniprot/P50846 P50846]
 +
** [http://www.uniprot.org/uniprot/P38448 P38448]
 +
** [http://www.uniprot.org/uniprot/Q55872 Q55872]
 +
** [http://www.uniprot.org/uniprot/P94802 P94802]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Sulfatase-modifying factor 2 precursor}}
+
{{#set: common name=KDPG/KHG aldolase}}
−
{{#set: ec number=EC-1.8.3.b}}
+
{{#set: ec number=EC-4.1.2.55}}
−
{{#set: gene associated=Ec-20_001020}}
+
{{#set: ec number=EC-4.1.2.14}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Ec-27_004070}}
 +
{{#set: in pathway=PWY-2221|PWY-7310|PWY-6507|GALACTUROCAT-PWY|ENTNER-DOUDOROFF-PWY|PWY-7562|PWY-7242}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:22, 21 March 2018

Reaction KDPGALDOL-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-dehydro-3-deoxy-D-gluconate 6-phosphate[c] => 1 D-glyceraldehyde 3-phosphate[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2221, Entner-Doudoroff pathway III (semi-phosphorylative): PWY-2221
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-7310, D-glucosaminate degradation: PWY-7310
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6507, 4-deoxy-L-threo-hex-4-enopyranuronate degradation: PWY-6507
    • 2 reactions found over 5 reactions in the full pathway
  • GALACTUROCAT-PWY, D-galacturonate degradation I: GALACTUROCAT-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • ENTNER-DOUDOROFF-PWY, Entner-Doudoroff pathway I: ENTNER-DOUDOROFF-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7562, 3,6-anhydro-α-L-galactopyranose degradation: PWY-7562
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7242, D-fructuronate degradation: PWY-7242
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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