Difference between revisions of "PWY-6824"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1568 PWY0-1568] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA-splicing endonuc...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | ||
* common name: | * common name: | ||
| − | ** | + | ** tRNA-splicing endonuclease subunit Sen15 |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.6.1.16 EC-4.6.1.16] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | + | * With identifiers: | |
| − | + | ** 1 [[CPD0-2350]][c] '''=>''' 1 [[tRNA-Introns]][c] '''+''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] | |
| − | * | + | * With common name(s): |
| − | ** | + | ** 1 a polycistronic tRNA precursor[c] '''=>''' 1 a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus[c] '''+''' 1 a 3' half-tRNA molecule with a hydroxyl on its 5' end[c] '''+''' 1 a 5' half-tRNA molecule with a 2',3' cyclic phosphate on its 3' end[c] |
| − | * | + | |
| − | ** | + | == Genes associated with this reaction == |
| − | ** | + | Genes have been associated with this reaction based on different elements listed below. |
| − | + | * Gene: [[Ec-21_006500]] | |
| − | == | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | * [http://metacyc.org/META/NEW-IMAGE?object= | + | *** Assignment: AUTOMATED-NAME-MATCH |
| + | == Pathways == | ||
| + | * [[PWY-6689]], tRNA splicing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | * | + | * UNIPROT: |
| − | ** [http:// | + | ** [http://www.uniprot.org/uniprot/O07118 O07118] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=tRNA-splicing endonuclease subunit Sen15}} |
| − | {{#set: | + | {{#set: ec number=EC-4.6.1.16}} |
| − | {{#set: | + | {{#set: gene associated=Ec-21_006500}} |
| − | {{#set: | + | {{#set: in pathway=PWY-6689}} |
| − | {{#set: | + | {{#set: reconstruction category=annotation}} |
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 13:23, 21 March 2018
Contents
Reaction 3.1.27.9-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- tRNA-splicing endonuclease subunit Sen15
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD0-2350[c] => 1 tRNA-Introns[c] + 1 Pre-tRNA-3-prime-half-molecules[c] + 1 Pre-tRNA-5-prime-half-molecules[c]
- With common name(s):
- 1 a polycistronic tRNA precursor[c] => 1 a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus[c] + 1 a 3' half-tRNA molecule with a hydroxyl on its 5' end[c] + 1 a 5' half-tRNA molecule with a 2',3' cyclic phosphate on its 3' end[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-21_006500
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- UNIPROT:
